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TEX53 (testis expressed 53)

Identity

Alias (NCBI)-
HGNC (Hugo) TEX53
LocusID (NCBI) 105376230
Atlas_Id 80282
Location 9q32  [Link to chromosome band 9q32]
Location_base_pair Starts at 114656304 and ends at 114657823 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)TEX53   53655
Cards
Entrez_Gene (NCBI)TEX53  105376230  testis expressed 53
Aliases
GeneCards (Weizmann)TEX53
Ensembl hg19 (Hinxton)ENSG00000230054 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230054 [Gene_View]  ENSG00000230054 [Sequence]  chr9:114656304-114657823 [Contig_View]  TEX53 [Vega]
ICGC DataPortalENSG00000230054
TCGA cBioPortalTEX53
AceView (NCBI)TEX53
Genatlas (Paris)TEX53
WikiGenes105376230
SOURCE (Princeton)TEX53
Genetics Home Reference (NIH)TEX53
Genomic and cartography
GoldenPath hg38 (UCSC)TEX53  -     chr9:114656304-114657823 -  9q32   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TEX53  -     9q32   [Description]    (hg19-Feb_2009)
GoldenPathTEX53 - 9q32 [CytoView hg19]  TEX53 - 9q32 [CytoView hg38]
ImmunoBaseENSG00000230054
genome Data Viewer NCBITEX53 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BG189493 HY042793
RefSeq transcript (Entrez)NM_001354645
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TEX53
Alternative Splicing GalleryENSG00000230054
Gene ExpressionTEX53 [ NCBI-GEO ]   TEX53 [ EBI - ARRAY_EXPRESS ]   TEX53 [ SEEK ]   TEX53 [ MEM ]
Gene Expression Viewer (FireBrowse)TEX53 [ Firebrowse - Broad ]
GenevisibleExpression of TEX53 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)105376230
GTEX Portal (Tissue expression)TEX53
Human Protein AtlasENSG00000230054-TEX53 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TEX53
DMDM Disease mutations105376230
Blocks (Seattle)TEX53
Human Protein Atlas [tissue]ENSG00000230054-TEX53 [tissue]
Protein Interaction databases
FunCoupENSG00000230054
BioGRIDTEX53
STRING (EMBL)TEX53
ZODIACTEX53
Ontologies - Pathways
Huge Navigator TEX53 [HugePedia]
snp3D : Map Gene to Disease105376230
BioCentury BCIQTEX53
ClinGenTEX53
Clinical trials, drugs, therapy
Protein Interactions : CTD105376230
Clinical trialTEX53
Miscellaneous
canSAR (ICR)TEX53 (select the gene name)
HarmonizomeTEX53
DataMed IndexTEX53
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTEX53
EVEXTEX53
GoPubMedTEX53
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Jul 16 16:32:28 CEST 2020
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