| DCUN1D2 (13q34) / TFDP1 (13q34) | FAM122C (Xq26.3) / TFDP1 (13q34) | LOC100507412 (-) / TFDP1 (13q34) |
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NF1 (17q11.2) / TFDP1 (13q34) | SHANK2 (11q13.3) / TFDP1 (13q34) | TFDP1 (13q34) / CUL4A (13q34) |
|
TFDP1 (13q34) / GRK1 (13q34) | TFDP1 (13q34) / TMCO3 (13q34) | TFDP1 (13q34) / TMEM255B (13q34) |
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TUBGCP3 (13q34) / TFDP1 (13q34) | TFDP1 13q34 / CUL4A 13q34 | TFDP1 13q34 / TMCO3 13q34 |
|
TUBGCP3 13q34 / TFDP1 13q34 |
| Nomenclature |
HGNC (Hugo) | TFDP1 11749 |
| Cards |
Entrez_Gene (NCBI) | TFDP1 7027 transcription factor Dp-1 |
Aliases | DILC; DP1; DRTF1; Dp-1 |
GeneCards (Weizmann) | TFDP1 |
Ensembl hg19 (Hinxton) | ENSG00000198176 [Gene_View] |
Ensembl hg38 (Hinxton) | ENSG00000198176 [Gene_View]  ENSG00000198176 [Sequence] chr13:113584741-113641473 [Contig_View] TFDP1 [Vega] |
ICGC DataPortal | ENSG00000198176 |
TCGA cBioPortal | TFDP1 |
AceView (NCBI) | TFDP1 |
Genatlas (Paris) | TFDP1 |
WikiGenes | 7027 |
SOURCE (Princeton) | TFDP1 |
Genetics Home Reference (NIH) | TFDP1 |
| Genomic and cartography |
GoldenPath hg38 (UCSC) | TFDP1 - chr13:113584741-113641473 + 13q34 [Description] (hg38-Dec_2013) |
GoldenPath hg19 (UCSC) | TFDP1 - 13q34 [Description] (hg19-Feb_2009) |
GoldenPath | TFDP1 - 13q34 [CytoView hg19] TFDP1 - 13q34 [CytoView hg38] |
ImmunoBase | ENSG00000198176 |
Mapping of homologs : NCBI | TFDP1 [Mapview hg19] TFDP1 [Mapview hg38] |
OMIM | 189902 |
| Gene and transcription |
Genbank (Entrez) | AK297114 AK298521 AK310401 AK313742 BC011685 |
RefSeq transcript (Entrez) | NM_007111 |
RefSeq genomic (Entrez) | |
Consensus coding sequences : CCDS (NCBI) | TFDP1 |
Cluster EST : Unigene | Hs.79353 [ NCBI ] |
CGAP (NCI) | Hs.79353 |
Alternative Splicing Gallery | ENSG00000198176 |
Gene Expression | TFDP1 [ NCBI-GEO ] TFDP1 [ EBI - ARRAY_EXPRESS ]
TFDP1 [ SEEK ] TFDP1 [ MEM ] |
Gene Expression Viewer (FireBrowse) | TFDP1 [ Firebrowse - Broad ] |
SOURCE (Princeton) | Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60] |
Genevestigator | Expression in : [tissues]  [cell-lines]  [cancer]  [perturbations]   |
BioGPS (Tissue expression) | 7027 |
GTEX Portal (Tissue expression) | TFDP1 |
Human Protein Atlas | ENSG00000198176-TFDP1 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
UniProt/SwissProt | Q14186 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
NextProt | Q14186 [Sequence] [Exons] [Medical] [Publications] |
With graphics : InterPro | Q14186 |
Splice isoforms : SwissVar | Q14186 |
PhosPhoSitePlus | Q14186 |
Domains : Interpro (EBI) | DP-1 E2F-DP_heterodim E2F_WHTH_DNA-bd_dom TF_DP_C_sf Transc_factor_DP_C Transcrpt_fac_DP WH-like_DNA-bd_sf WH_DNA-bd_sf |
Domain families : Pfam (Sanger) | DP (PF08781) E2F_TDP (PF02319) |
Domain families : Pfam (NCBI) | pfam08781 pfam02319 |
Domain families : Smart (EMBL) | DP (SM01138) E2F_TDP (SM01372) |
Conserved Domain (NCBI) | TFDP1 |
DMDM Disease mutations | 7027 |
Blocks (Seattle) | TFDP1 |
PDB (RSDB) | 2AZE 5GOW 5TUU 5TUV |
PDB Europe | 2AZE 5GOW 5TUU 5TUV |
PDB (PDBSum) | 2AZE 5GOW 5TUU 5TUV |
PDB (IMB) | 2AZE 5GOW 5TUU 5TUV |
Structural Biology KnowledgeBase | 2AZE 5GOW 5TUU 5TUV |
SCOP (Structural Classification of Proteins) | 2AZE 5GOW 5TUU 5TUV |
CATH (Classification of proteins structures) | 2AZE 5GOW 5TUU 5TUV |
Superfamily | Q14186 |
Human Protein Atlas [tissue] | ENSG00000198176-TFDP1 [tissue] |
Peptide Atlas | Q14186 |
HPRD | 01792 |
IPI | IPI00029095 IPI01012465 IPI00955832 IPI00922297 IPI00647724 IPI00641864 |
| Protein Interaction databases |
DIP (DOE-UCLA) | Q14186 |
IntAct (EBI) | Q14186 |
FunCoup | ENSG00000198176 |
BioGRID | TFDP1 |
STRING (EMBL) | TFDP1 |
ZODIAC | TFDP1 |
| Ontologies - Pathways |
QuickGO | Q14186 |
Ontology : AmiGO | regulation of transcription involved in G1/S transition of mitotic cell cycle RNA polymerase II regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription factor activity transcription coactivator activity protein binding nucleus nucleoplasm nucleoplasm mitochondrion cytosol regulation of transcription by RNA polymerase II DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest transcription factor binding epidermis development protein domain specific binding anoikis positive regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II negative regulation of G0 to G1 transition negative regulation of fat cell proliferation RNA polymerase II transcription factor complex positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway regulation of DNA biosynthetic process |
Ontology : EGO-EBI | regulation of transcription involved in G1/S transition of mitotic cell cycle RNA polymerase II regulatory region sequence-specific DNA binding DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription factor activity, RNA polymerase II-specific DNA-binding transcription activator activity, RNA polymerase II-specific DNA-binding transcription factor activity transcription coactivator activity protein binding nucleus nucleoplasm nucleoplasm mitochondrion cytosol regulation of transcription by RNA polymerase II DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest transcription factor binding epidermis development protein domain specific binding anoikis positive regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II negative regulation of G0 to G1 transition negative regulation of fat cell proliferation RNA polymerase II transcription factor complex positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway regulation of DNA biosynthetic process |
Pathways : KEGG | Cell cycle TGF-beta signaling pathway |
NDEx Network | TFDP1 |
Atlas of Cancer Signalling Network | TFDP1 |
Wikipedia pathways | TFDP1 |
| Orthology - Evolution |
OrthoDB | 7027 |
GeneTree (enSembl) | ENSG00000198176 |
Phylogenetic Trees/Animal Genes : TreeFam | TFDP1 |
HOGENOM | Q14186 |
Homologs : HomoloGene | TFDP1 |
Homology/Alignments : Family Browser (UCSC) | TFDP1 |
| Gene fusions - Rearrangements |
Fusion Portal | TFDP1 13q34 CUL4A 13q34 LUAD |
Fusion Portal | TFDP1 13q34 TMCO3 13q34 BRCA |
Fusion Portal | TUBGCP3 13q34 TFDP1 13q34 HNSC |
Fusion : Quiver | TFDP1 |
| Polymorphisms : SNP and Copy number variants |
NCBI Variation Viewer | TFDP1 [hg38] |
dbSNP Single Nucleotide Polymorphism (NCBI) | TFDP1 |
dbVar | TFDP1 |
ClinVar | TFDP1 |
1000_Genomes | TFDP1 |
Exome Variant Server | TFDP1 |
ExAC (Exome Aggregation Consortium) | ENSG00000198176 |
GNOMAD Browser | ENSG00000198176 |
Varsome Browser | TFDP1 |
Genetic variants : HAPMAP | 7027 |
Genomic Variants (DGV) | TFDP1 [DGVbeta] |
DECIPHER | TFDP1 [patients] [syndromes] [variants] [genes] |
CONAN: Copy Number Analysis | TFDP1 |
| Mutations |
ICGC Data Portal | TFDP1 |
TCGA Data Portal | TFDP1 |
Broad Tumor Portal | TFDP1 |
OASIS Portal | TFDP1 [ Somatic mutations - Copy number] |
Somatic Mutations in Cancer : COSMIC | TFDP1 [overview] [genome browser] [tissue] [distribution] |
Somatic Mutations in Cancer : COSMIC3D | TFDP1 |
Mutations and Diseases : HGMD | TFDP1 |
intOGen Portal | TFDP1 |
LOVD (Leiden Open Variation Database) | Whole genome datasets |
LOVD (Leiden Open Variation Database) | LOVD - Leiden Open Variation Database |
LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
BioMuta | search TFDP1 |
DgiDB (Drug Gene Interaction Database) | TFDP1 |
DoCM (Curated mutations) | TFDP1 (select the gene name) |
CIViC (Clinical Interpretations of Variants in Cancer) | TFDP1 (select a term) |
intoGen | TFDP1 |
Cancer3D | TFDP1(select the gene name) |
Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
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OMIM | 189902 |
Orphanet | |
DisGeNET | TFDP1 |
Medgen | TFDP1 |
Genetic Testing Registry | TFDP1
|
NextProt | Q14186 [Medical] |
TSGene | 7027 |
GENETests | TFDP1 |
Target Validation | TFDP1 |
Huge Navigator |
TFDP1 [HugePedia] |
snp3D : Map Gene to Disease | 7027 |
BioCentury BCIQ | TFDP1 |
ClinGen | TFDP1 |
| Clinical trials, drugs, therapy |
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Chemical/Protein Interactions : CTD | 7027 |
Chemical/Pharm GKB Gene | PA36464 |
Clinical trial | TFDP1 |
| Miscellaneous |
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canSAR (ICR) | TFDP1 (select the gene name) |
DataMed Index | TFDP1 |
| Probes |
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| Litterature |
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PubMed | 82 Pubmed reference(s) in Entrez |
GeneRIFs | Gene References Into Functions (Entrez) |
CoreMine | TFDP1 |
EVEX | TFDP1 |
GoPubMed | TFDP1 |
iHOP | TFDP1 |