Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TIMM10 (translocase of inner mitochondrial membrane 10)

Identity

Alias_namestranslocase of inner mitochondrial membrane 10 (yeast) homolog
translocase of inner mitochondrial membrane 10 homolog (yeast)
Alias_symbol (synonym)TIM10
TIM10A
TIMM10A
Other alias
HGNC (Hugo) TIMM10
LocusID (NCBI) 26519
Atlas_Id 42562
Location 11q12.1  [Link to chromosome band 11q12]
Location_base_pair Starts at 57528463 and ends at 57530759 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)TIMM10   11814
Cards
Entrez_Gene (NCBI)TIMM10  26519  translocase of inner mitochondrial membrane 10
AliasesTIM10; TIM10A; TIMM10A
GeneCards (Weizmann)TIMM10
Ensembl hg19 (Hinxton)ENSG00000134809 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000134809 [Gene_View]  ENSG00000134809 [Sequence]  chr11:57528463-57530759 [Contig_View]  TIMM10 [Vega]
ICGC DataPortalENSG00000134809
TCGA cBioPortalTIMM10
AceView (NCBI)TIMM10
Genatlas (Paris)TIMM10
WikiGenes26519
SOURCE (Princeton)TIMM10
Genetics Home Reference (NIH)TIMM10
Genomic and cartography
GoldenPath hg38 (UCSC)TIMM10  -     chr11:57528463-57530759 -  11q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TIMM10  -     11q12.1   [Description]    (hg19-Feb_2009)
GoldenPathTIMM10 - 11q12.1 [CytoView hg19]  TIMM10 - 11q12.1 [CytoView hg38]
ImmunoBaseENSG00000134809
Mapping of homologs : NCBITIMM10 [Mapview hg19]  TIMM10 [Mapview hg38]
OMIM602251   
Gene and transcription
Genbank (Entrez)AF150089 AF152354 AI498204 AK289751 BC032133
RefSeq transcript (Entrez)NM_012456
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TIMM10
Cluster EST : UnigeneHs.235750 [ NCBI ]
CGAP (NCI)Hs.235750
Alternative Splicing GalleryENSG00000134809
Gene ExpressionTIMM10 [ NCBI-GEO ]   TIMM10 [ EBI - ARRAY_EXPRESS ]   TIMM10 [ SEEK ]   TIMM10 [ MEM ]
Gene Expression Viewer (FireBrowse)TIMM10 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26519
GTEX Portal (Tissue expression)TIMM10
Human Protein AtlasENSG00000134809-TIMM10 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP62072   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP62072  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP62072
Splice isoforms : SwissVarP62072
PhosPhoSitePlusP62072
Domains : Interpro (EBI)Tim10    Tim10-like    Tim10-like_dom_sf    Tim10/12   
Domain families : Pfam (Sanger)zf-Tim10_DDP (PF02953)   
Domain families : Pfam (NCBI)pfam02953   
Conserved Domain (NCBI)TIMM10
DMDM Disease mutations26519
Blocks (Seattle)TIMM10
PDB (RSDB)2BSK   
PDB Europe2BSK   
PDB (PDBSum)2BSK   
PDB (IMB)2BSK   
Structural Biology KnowledgeBase2BSK   
SCOP (Structural Classification of Proteins)2BSK   
CATH (Classification of proteins structures)2BSK   
SuperfamilyP62072
Human Protein Atlas [tissue]ENSG00000134809-TIMM10 [tissue]
Peptide AtlasP62072
HPRD03768
IPIIPI00001543   
Protein Interaction databases
DIP (DOE-UCLA)P62072
IntAct (EBI)P62072
FunCoupENSG00000134809
BioGRIDTIMM10
STRING (EMBL)TIMM10
ZODIACTIMM10
Ontologies - Pathways
QuickGOP62072
Ontology : AmiGOprotein binding  mitochondrion  mitochondrial inner membrane  mitochondrial inner membrane  mitochondrial inner membrane  TIM23 mitochondrial import inner membrane translocase complex  mitochondrial intermembrane space  protein targeting to mitochondrion  sensory perception of sound  zinc ion binding  mitochondrial intermembrane space protein transporter complex  protein homodimerization activity  protein import into mitochondrial inner membrane  protein import into mitochondrial inner membrane  protein import into mitochondrial inner membrane  chaperone binding  chaperone-mediated protein transport  
Ontology : EGO-EBIprotein binding  mitochondrion  mitochondrial inner membrane  mitochondrial inner membrane  mitochondrial inner membrane  TIM23 mitochondrial import inner membrane translocase complex  mitochondrial intermembrane space  protein targeting to mitochondrion  sensory perception of sound  zinc ion binding  mitochondrial intermembrane space protein transporter complex  protein homodimerization activity  protein import into mitochondrial inner membrane  protein import into mitochondrial inner membrane  protein import into mitochondrial inner membrane  chaperone binding  chaperone-mediated protein transport  
NDEx NetworkTIMM10
Atlas of Cancer Signalling NetworkTIMM10
Wikipedia pathwaysTIMM10
Orthology - Evolution
OrthoDB26519
GeneTree (enSembl)ENSG00000134809
Phylogenetic Trees/Animal Genes : TreeFamTIMM10
HOGENOMP62072
Homologs : HomoloGeneTIMM10
Homology/Alignments : Family Browser (UCSC)TIMM10
Gene fusions - Rearrangements
Fusion : QuiverTIMM10
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTIMM10 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TIMM10
dbVarTIMM10
ClinVarTIMM10
1000_GenomesTIMM10 
Exome Variant ServerTIMM10
ExAC (Exome Aggregation Consortium)ENSG00000134809
GNOMAD BrowserENSG00000134809
Varsome BrowserTIMM10
Genetic variants : HAPMAP26519
Genomic Variants (DGV)TIMM10 [DGVbeta]
DECIPHERTIMM10 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTIMM10 
Mutations
ICGC Data PortalTIMM10 
TCGA Data PortalTIMM10 
Broad Tumor PortalTIMM10
OASIS PortalTIMM10 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICTIMM10  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DTIMM10
Mutations and Diseases : HGMDTIMM10
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)MSeqDR-LSDB Mitochondrial Disease Locus Specific Database
BioMutasearch TIMM10
DgiDB (Drug Gene Interaction Database)TIMM10
DoCM (Curated mutations)TIMM10 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TIMM10 (select a term)
intoGenTIMM10
Cancer3DTIMM10(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM602251   
Orphanet
DisGeNETTIMM10
MedgenTIMM10
Genetic Testing Registry TIMM10
NextProtP62072 [Medical]
TSGene26519
GENETestsTIMM10
Target ValidationTIMM10
Huge Navigator TIMM10 [HugePedia]
snp3D : Map Gene to Disease26519
BioCentury BCIQTIMM10
ClinGenTIMM10
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD26519
Chemical/Pharm GKB GenePA36521
Clinical trialTIMM10
Miscellaneous
canSAR (ICR)TIMM10 (select the gene name)
DataMed IndexTIMM10
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTIMM10
EVEXTIMM10
GoPubMedTIMM10
iHOPTIMM10
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Nov 13 18:11:44 CET 2019
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.