TM6SF1 (transmembrane 6 superfamily member 1)

2015-05-01  

Identity

HGNC
TM6SF1
LOCATION
15q25.2
LOCUSID
53346
ALIAS
-
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 53346
MIM: 606562
HGNC: 11860
Ensembl: ENSG00000136404

Variants:

dbSNP: 53346
ClinVar: 53346
TCGA: ENSG00000136404
COSMIC: TM6SF1

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000136404ENST00000258909Q8N5N8
ENSG00000136404ENST00000322019Q9BZW5
ENSG00000136404ENST00000379384E9PD04
ENSG00000136404ENST00000379390Q6P4D7
ENSG00000136404ENST00000561551H3BMK0
ENSG00000136404ENST00000565774Q9BZW5
ENSG00000136404ENST00000565982H3BM84

Expression (GTEx)

0
5
10
15
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

References

Pubmed IDYearTitleCitations
251233952014Validation of DNA promoter hypermethylation biomarkers in breast cancer--a short report.9

Citation

Dessen P

TM6SF1 (transmembrane 6 superfamily member 1)

Atlas Genet Cytogenet Oncol Haematol. 2015-05-01

Online version: http://atlasgeneticsoncology.org/gene/55226/tm6sf1