| Nomenclature |
HGNC (Hugo) | TMED10 16998 |
| Cards |
Entrez_Gene (NCBI) | TMED10 10972 transmembrane p24 trafficking protein 10 |
Aliases | P24(DELTA); S31I125; S31III125; TMP21; |
| Tmp-21-I; p23; p24d1 |
GeneCards (Weizmann) | TMED10 |
Ensembl hg19 (Hinxton) | ENSG00000170348 [Gene_View] |
Ensembl hg38 (Hinxton) | ENSG00000170348 [Gene_View]  ENSG00000170348 [Sequence] chr14:75131468-75176646 [Contig_View] TMED10 [Vega] |
ICGC DataPortal | ENSG00000170348 |
TCGA cBioPortal | TMED10 |
AceView (NCBI) | TMED10 |
Genatlas (Paris) | TMED10 |
WikiGenes | 10972 |
SOURCE (Princeton) | TMED10 |
Genetics Home Reference (NIH) | TMED10 |
| Genomic and cartography |
GoldenPath hg38 (UCSC) | TMED10 - chr14:75131468-75176646 - 14q24.3 [Description] (hg38-Dec_2013) |
GoldenPath hg19 (UCSC) | TMED10 - 14q24.3 [Description] (hg19-Feb_2009) |
GoldenPath | TMED10 - 14q24.3 [CytoView hg19] TMED10 - 14q24.3 [CytoView hg38] |
ImmunoBase | ENSG00000170348 |
Mapping of homologs : NCBI | TMED10 [Mapview hg19] TMED10 [Mapview hg38] |
OMIM | 605406 |
| Gene and transcription |
Genbank (Entrez) | AJ004913 AK023615 AK056156 AK222972 AK296800 |
RefSeq transcript (Entrez) | NM_006827 |
RefSeq genomic (Entrez) | |
Consensus coding sequences : CCDS (NCBI) | TMED10 |
Cluster EST : Unigene | Hs.74137 [ NCBI ] |
CGAP (NCI) | Hs.74137 |
Alternative Splicing Gallery | ENSG00000170348 |
Gene Expression | TMED10 [ NCBI-GEO ] TMED10 [ EBI - ARRAY_EXPRESS ]
TMED10 [ SEEK ] TMED10 [ MEM ] |
Gene Expression Viewer (FireBrowse) | TMED10 [ Firebrowse - Broad ] |
SOURCE (Princeton) | Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60] |
Genevestigator | Expression in : [tissues]  [cell-lines]  [cancer]  [perturbations]   |
BioGPS (Tissue expression) | 10972 |
GTEX Portal (Tissue expression) | TMED10 |
Human Protein Atlas | ENSG00000170348-TMED10 [pathology] [cell] [tissue] |
| Protein : pattern, domain, 3D structure |
UniProt/SwissProt | P49755 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
NextProt | P49755 [Sequence] [Exons] [Medical] [Publications] |
With graphics : InterPro | P49755 |
Splice isoforms : SwissVar | P49755 |
PhosPhoSitePlus | P49755 |
Domaine pattern : Prosite (Expaxy) | GOLD (PS50866) |
Domains : Interpro (EBI) | GOLD_dom TMP21-related |
Domain families : Pfam (Sanger) | EMP24_GP25L (PF01105) |
Domain families : Pfam (NCBI) | pfam01105 |
Domain families : Smart (EMBL) | EMP24_GP25L (SM01190) |
Conserved Domain (NCBI) | TMED10 |
DMDM Disease mutations | 10972 |
Blocks (Seattle) | TMED10 |
Superfamily | P49755 |
Human Protein Atlas [tissue] | ENSG00000170348-TMED10 [tissue] |
Peptide Atlas | P49755 |
HPRD | 12013 |
IPI | IPI00028055 IPI01026466 |
| Protein Interaction databases |
DIP (DOE-UCLA) | P49755 |
IntAct (EBI) | P49755 |
FunCoup | ENSG00000170348 |
BioGRID | TMED10 |
STRING (EMBL) | TMED10 |
ZODIAC | TMED10 |
| Ontologies - Pathways |
QuickGO | P49755 |
Ontology : AmiGO | Golgi membrane kidney development protein binding endoplasmic reticulum endoplasmic reticulum endoplasmic reticulum membrane endoplasmic reticulum-Golgi intermediate compartment endoplasmic reticulum-Golgi intermediate compartment Golgi apparatus Golgi apparatus cis-Golgi network plasma membrane intracellular protein transport intracellular protein transport ER to Golgi vesicle-mediated transport ER to Golgi vesicle-mediated transport retrograde vesicle-mediated transport, Golgi to ER retrograde vesicle-mediated transport, Golgi to ER Golgi organization ER to Golgi transport vesicle membrane integral component of membrane syntaxin binding transport vesicle COPII-coated ER to Golgi transport vesicle COPI-coated vesicle COPI-coated vesicle trans-Golgi network transport vesicle secretory granule membrane endoplasmic reticulum-Golgi intermediate compartment membrane cargo loading into vesicle COPI-coated vesicle budding melanosome zymogen granule membrane response to alkaloid protein-containing complex binding regulated exocytosis vesicle targeting, to, from or within Golgi COPI coating of Golgi vesicle COPII vesicle coating protein complex oligomerization gamma-secretase complex regulation of amyloid-beta formation |
Ontology : EGO-EBI | Golgi membrane kidney development protein binding endoplasmic reticulum endoplasmic reticulum endoplasmic reticulum membrane endoplasmic reticulum-Golgi intermediate compartment endoplasmic reticulum-Golgi intermediate compartment Golgi apparatus Golgi apparatus cis-Golgi network plasma membrane intracellular protein transport intracellular protein transport ER to Golgi vesicle-mediated transport ER to Golgi vesicle-mediated transport retrograde vesicle-mediated transport, Golgi to ER retrograde vesicle-mediated transport, Golgi to ER Golgi organization ER to Golgi transport vesicle membrane integral component of membrane syntaxin binding transport vesicle COPII-coated ER to Golgi transport vesicle COPI-coated vesicle COPI-coated vesicle trans-Golgi network transport vesicle secretory granule membrane endoplasmic reticulum-Golgi intermediate compartment membrane cargo loading into vesicle COPI-coated vesicle budding melanosome zymogen granule membrane response to alkaloid protein-containing complex binding regulated exocytosis vesicle targeting, to, from or within Golgi COPI coating of Golgi vesicle COPII vesicle coating protein complex oligomerization gamma-secretase complex regulation of amyloid-beta formation |
NDEx Network | TMED10 |
Atlas of Cancer Signalling Network | TMED10 |
Wikipedia pathways | TMED10 |
| Orthology - Evolution |
OrthoDB | 10972 |
GeneTree (enSembl) | ENSG00000170348 |
Phylogenetic Trees/Animal Genes : TreeFam | TMED10 |
HOGENOM | P49755 |
Homologs : HomoloGene | TMED10 |
Homology/Alignments : Family Browser (UCSC) | TMED10 |
| Gene fusions - Rearrangements |
Fusion : Quiver | TMED10 |
| Polymorphisms : SNP and Copy number variants |
NCBI Variation Viewer | TMED10 [hg38] |
dbSNP Single Nucleotide Polymorphism (NCBI) | TMED10 |
dbVar | TMED10 |
ClinVar | TMED10 |
1000_Genomes | TMED10 |
Exome Variant Server | TMED10 |
ExAC (Exome Aggregation Consortium) | ENSG00000170348 |
GNOMAD Browser | ENSG00000170348 |
Varsome Browser | TMED10 |
Genetic variants : HAPMAP | 10972 |
Genomic Variants (DGV) | TMED10 [DGVbeta] |
DECIPHER | TMED10 [patients] [syndromes] [variants] [genes] |
CONAN: Copy Number Analysis | TMED10 |
| Mutations |
ICGC Data Portal | TMED10 |
TCGA Data Portal | TMED10 |
Broad Tumor Portal | TMED10 |
OASIS Portal | TMED10 [ Somatic mutations - Copy number] |
Somatic Mutations in Cancer : COSMIC | TMED10 [overview] [genome browser] [tissue] [distribution] |
Somatic Mutations in Cancer : COSMIC3D | TMED10 |
Mutations and Diseases : HGMD | TMED10 |
LOVD (Leiden Open Variation Database) | Whole genome datasets |
LOVD (Leiden Open Variation Database) | LOVD - Leiden Open Variation Database |
LOVD (Leiden Open Variation Database) | LOVD 3.0 shared installation |
BioMuta | search TMED10 |
DgiDB (Drug Gene Interaction Database) | TMED10 |
DoCM (Curated mutations) | TMED10 (select the gene name) |
CIViC (Clinical Interpretations of Variants in Cancer) | TMED10 (select a term) |
intoGen | TMED10 |
Cancer3D | TMED10(select the gene name) |
Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
---|
OMIM | 605406 |
Orphanet | |
DisGeNET | TMED10 |
Medgen | TMED10 |
Genetic Testing Registry | TMED10
|
NextProt | P49755 [Medical] |
TSGene | 10972 |
GENETests | TMED10 |
Target Validation | TMED10 |
Huge Navigator |
TMED10 [HugePedia] |
snp3D : Map Gene to Disease | 10972 |
BioCentury BCIQ | TMED10 |
ClinGen | TMED10 |
| Clinical trials, drugs, therapy |
---|
Chemical/Protein Interactions : CTD | 10972 |
Chemical/Pharm GKB Gene | PA128394579 |
Clinical trial | TMED10 |
| Miscellaneous |
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canSAR (ICR) | TMED10 (select the gene name) |
DataMed Index | TMED10 |
| Probes |
---|
| Litterature |
---|
PubMed | 79 Pubmed reference(s) in Entrez |
GeneRIFs | Gene References Into Functions (Entrez) |
CoreMine | TMED10 |
EVEX | TMED10 |
GoPubMed | TMED10 |
iHOP | TMED10 |