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TMED7-TICAM2 (TMED7-TICAM2 readthrough)

Identity

Other aliasMyD88-4
TICAM-2
TICAM2
TIRAP3
TIRP
TRAM
HGNC (Hugo) TMED7-TICAM2
LocusID (NCBI) 100302736
Atlas_Id 74766
Location 5q22.3  [Link to chromosome band 5q22]
Location_base_pair Starts at 115578496 and ends at 115626179 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MGA (15q15.1) / TMED7-TICAM2 (5q22.3)PPDPF (20q13.33) / TMED7-TICAM2 (5q22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)TMED7-TICAM2   33945
Cards
Entrez_Gene (NCBI)TMED7-TICAM2  100302736  TMED7-TICAM2 readthrough
AliasesMyD88-4; TICAM-2; TICAM2; TIRAP3; 
TIRP; TRAM
GeneCards (Weizmann)TMED7-TICAM2
Ensembl hg19 (Hinxton)ENSG00000251201 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000251201 [Gene_View]  ENSG00000251201 [Sequence]  chr5:115578496-115626179 [Contig_View]  TMED7-TICAM2 [Vega]
ICGC DataPortalENSG00000251201
TCGA cBioPortalTMED7-TICAM2
AceView (NCBI)TMED7-TICAM2
Genatlas (Paris)TMED7-TICAM2
WikiGenes100302736
SOURCE (Princeton)TMED7-TICAM2
Genetics Home Reference (NIH)TMED7-TICAM2
Genomic and cartography
GoldenPath hg38 (UCSC)TMED7-TICAM2  -     chr5:115578496-115626179 -  5q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMED7-TICAM2  -     5q22.3   [Description]    (hg19-Feb_2009)
GoldenPathTMED7-TICAM2 - 5q22.3 [CytoView hg19]  TMED7-TICAM2 - 5q22.3 [CytoView hg38]
ImmunoBaseENSG00000251201
Mapping of homologs : NCBITMED7-TICAM2 [Mapview hg19]  TMED7-TICAM2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK075218 AY275836 AY304581 AY304583 AY304584
RefSeq transcript (Entrez)NM_001164468 NM_001164469
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMED7-TICAM2
Alternative Splicing GalleryENSG00000251201
Gene ExpressionTMED7-TICAM2 [ NCBI-GEO ]   TMED7-TICAM2 [ EBI - ARRAY_EXPRESS ]   TMED7-TICAM2 [ SEEK ]   TMED7-TICAM2 [ MEM ]
Gene Expression Viewer (FireBrowse)TMED7-TICAM2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100302736
GTEX Portal (Tissue expression)TMED7-TICAM2
Human Protein AtlasENSG00000251201-TMED7-TICAM2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMED7-TICAM2
DMDM Disease mutations100302736
Blocks (Seattle)TMED7-TICAM2
Human Protein Atlas [tissue]ENSG00000251201-TMED7-TICAM2 [tissue]
Protein Interaction databases
FunCoupENSG00000251201
BioGRIDTMED7-TICAM2
STRING (EMBL)TMED7-TICAM2
ZODIACTMED7-TICAM2
Ontologies - Pathways
Huge Navigator TMED7-TICAM2 [HugePedia]
snp3D : Map Gene to Disease100302736
BioCentury BCIQTMED7-TICAM2
ClinGenTMED7-TICAM2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100302736
Chemical/Pharm GKB GenePA165660570
Clinical trialTMED7-TICAM2
Miscellaneous
canSAR (ICR)TMED7-TICAM2 (select the gene name)
DataMed IndexTMED7-TICAM2
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMED7-TICAM2
EVEXTMED7-TICAM2
GoPubMedTMED7-TICAM2
iHOPTMED7-TICAM2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 16:10:09 CEST 2019
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