Atlas of Genetics and Cytogenetics in Oncology and Haematology

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TMEM272 (transmembrane protein 272)

Identity

Alias_namesNCRNA00282
LINC00282
non-protein coding RNA 282
long intergenic non-protein coding RNA 282
Alias_symbol (synonym)FLJ37307
Other alias
HGNC (Hugo) TMEM272
LocusID (NCBI) 283521
Atlas_Id 78893
Location 13q14.3  [Link to chromosome band 13q14]
Location_base_pair Starts at 51813347 and ends at 51845152 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)TMEM272   26737
Cards
Entrez_Gene (NCBI)TMEM272  283521  transmembrane protein 272
AliasesLINC00282; NCRNA00282
GeneCards (Weizmann)TMEM272
Ensembl hg19 (Hinxton)ENSG00000281106 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000281106 [Gene_View]  ENSG00000281106 [Sequence]  chr13:51813347-51845152 [Contig_View]  TMEM272 [Vega]
ICGC DataPortalENSG00000281106
TCGA cBioPortalTMEM272
AceView (NCBI)TMEM272
Genatlas (Paris)TMEM272
WikiGenes283521
SOURCE (Princeton)TMEM272
Genetics Home Reference (NIH)TMEM272
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM272  -     chr13:51813347-51845152 -  13q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM272  -     13q14.3   [Description]    (hg19-Feb_2009)
GoldenPathTMEM272 - 13q14.3 [CytoView hg19]  TMEM272 - 13q14.3 [CytoView hg38]
ImmunoBaseENSG00000281106
Mapping of homologs : NCBITMEM272 [Mapview hg19]  TMEM272 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK094626 AK124707 BM661920 DA226291 DA338627
RefSeq transcript (Entrez)NM_001351003 NM_001351005 NM_001351006 NM_178515
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM272
Cluster EST : UnigeneHs.649896 [ NCBI ]
CGAP (NCI)Hs.649896
Alternative Splicing GalleryENSG00000281106
Gene ExpressionTMEM272 [ NCBI-GEO ]   TMEM272 [ EBI - ARRAY_EXPRESS ]   TMEM272 [ SEEK ]   TMEM272 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM272 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)283521
GTEX Portal (Tissue expression)TMEM272
Human Protein AtlasENSG00000281106-TMEM272 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM272
DMDM Disease mutations283521
Blocks (Seattle)TMEM272
Human Protein Atlas [tissue]ENSG00000281106-TMEM272 [tissue]
IPIIPI00166318   
Protein Interaction databases
FunCoupENSG00000281106
BioGRIDTMEM272
STRING (EMBL)TMEM272
ZODIACTMEM272
Ontologies - Pathways
Huge Navigator TMEM272 [HugePedia]
snp3D : Map Gene to Disease283521
BioCentury BCIQTMEM272
ClinGenTMEM272
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283521
Chemical/Pharm GKB GenePA165505324
Clinical trialTMEM272
Miscellaneous
canSAR (ICR)TMEM272 (select the gene name)
DataMed IndexTMEM272
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM272
EVEXTMEM272
GoPubMedTMEM272
iHOPTMEM272
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 16:10:39 CEST 2019
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