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TMEM273 (transmembrane protein 273)

Identity

Other aliasC10orf128
HGNC (Hugo) TMEM273
LocusID (NCBI) 170371
Atlas_Id 80618
Location 10q11.23  [Link to chromosome band 10q11]
Location_base_pair Starts at 49154724 and ends at 49188414 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TMEM273   27274
Cards
Entrez_Gene (NCBI)TMEM273  170371  transmembrane protein 273
AliasesC10orf128
GeneCards (Weizmann)TMEM273
Ensembl hg19 (Hinxton)ENSG00000204161 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204161 [Gene_View]  ENSG00000204161 [Sequence]  chr10:49154724-49188414 [Contig_View]  TMEM273 [Vega]
ICGC DataPortalENSG00000204161
TCGA cBioPortalTMEM273
AceView (NCBI)TMEM273
Genatlas (Paris)TMEM273
WikiGenes170371
SOURCE (Princeton)TMEM273
Genetics Home Reference (NIH)TMEM273
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM273  -     chr10:49154724-49188414 -  10q11.23   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM273  -     10q11.23   [Description]    (hg19-Feb_2009)
GoldenPathTMEM273 - 10q11.23 [CytoView hg19]  TMEM273 - 10q11.23 [CytoView hg38]
ImmunoBaseENSG00000204161
Mapping of homologs : NCBITMEM273 [Mapview hg19]  TMEM273 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK303891 AL524299 AL832399 BC031641 BC037922
RefSeq transcript (Entrez)NM_001010863 NM_001288740 NM_001288741 NM_001288742 NM_001288743 NM_001353330 NM_001353331
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM273
Cluster EST : UnigeneHs.385493 [ NCBI ]
CGAP (NCI)Hs.385493
Alternative Splicing GalleryENSG00000204161
Gene ExpressionTMEM273 [ NCBI-GEO ]   TMEM273 [ EBI - ARRAY_EXPRESS ]   TMEM273 [ SEEK ]   TMEM273 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM273 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)170371
GTEX Portal (Tissue expression)TMEM273
Human Protein AtlasENSG00000204161-TMEM273 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5T292   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5T292  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5T292
Splice isoforms : SwissVarQ5T292
PhosPhoSitePlusQ5T292
Domains : Interpro (EBI)DUF4514   
Domain families : Pfam (Sanger)DUF4514 (PF14986)   
Domain families : Pfam (NCBI)pfam14986   
Conserved Domain (NCBI)TMEM273
DMDM Disease mutations170371
Blocks (Seattle)TMEM273
SuperfamilyQ5T292
Human Protein Atlas [tissue]ENSG00000204161-TMEM273 [tissue]
Peptide AtlasQ5T292
IPIIPI00513963   IPI00514406   IPI00869108   IPI00456030   IPI00514560   IPI00514802   
Protein Interaction databases
DIP (DOE-UCLA)Q5T292
IntAct (EBI)Q5T292
FunCoupENSG00000204161
BioGRIDTMEM273
STRING (EMBL)TMEM273
ZODIACTMEM273
Ontologies - Pathways
QuickGOQ5T292
Ontology : AmiGOintegral component of membrane  
Ontology : EGO-EBIintegral component of membrane  
NDEx NetworkTMEM273
Atlas of Cancer Signalling NetworkTMEM273
Wikipedia pathwaysTMEM273
Orthology - Evolution
OrthoDB170371
GeneTree (enSembl)ENSG00000204161
Phylogenetic Trees/Animal Genes : TreeFamTMEM273
HOGENOMQ5T292
Homologs : HomoloGeneTMEM273
Homology/Alignments : Family Browser (UCSC)TMEM273
Gene fusions - Rearrangements
Fusion : QuiverTMEM273
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerTMEM273 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)TMEM273
dbVarTMEM273
ClinVarTMEM273
1000_GenomesTMEM273 
Exome Variant ServerTMEM273
ExAC (Exome Aggregation Consortium)ENSG00000204161
GNOMAD BrowserENSG00000204161
Varsome BrowserTMEM273
Genetic variants : HAPMAP170371
Genomic Variants (DGV)TMEM273 [DGVbeta]
DECIPHERTMEM273 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisTMEM273 
Mutations
ICGC Data PortalTMEM273 
TCGA Data PortalTMEM273 
Broad Tumor PortalTMEM273
OASIS PortalTMEM273 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDTMEM273
BioMutasearch TMEM273
DgiDB (Drug Gene Interaction Database)TMEM273
DoCM (Curated mutations)TMEM273 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)TMEM273 (select a term)
intoGenTMEM273
Cancer3DTMEM273(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETTMEM273
MedgenTMEM273
Genetic Testing Registry TMEM273
NextProtQ5T292 [Medical]
TSGene170371
GENETestsTMEM273
Target ValidationTMEM273
Huge Navigator TMEM273 [HugePedia]
snp3D : Map Gene to Disease170371
BioCentury BCIQTMEM273
ClinGenTMEM273
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD170371
Chemical/Pharm GKB GenePA134962893
Clinical trialTMEM273
Miscellaneous
canSAR (ICR)TMEM273 (select the gene name)
DataMed IndexTMEM273
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM273
EVEXTMEM273
GoPubMedTMEM273
iHOPTMEM273
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 16:10:39 CEST 2019

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