TMEM39A (transmembrane protein 39A)

2014-11-01  

Identity

HGNC
LOCATION
3q13.33
LOCUSID
ALIAS
SUSR2
FUSION GENES

Other Information

Locus ID:

NCBI: 55254
HGNC: 25600
Ensembl: ENSG00000176142

Variants:

dbSNP: 55254
ClinVar: 55254
TCGA: ENSG00000176142
COSMIC: TMEM39A

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000176142ENST00000319172Q9NV64
ENSG00000176142ENST00000438581Q9NV64
ENSG00000176142ENST00000461654C9JYN8
ENSG00000176142ENST00000468676C9IYN1
ENSG00000176142ENST00000473684H7C5P7
ENSG00000176142ENST00000490099F8WAU1
ENSG00000176142ENST00000491685C9K0C7
ENSG00000176142ENST00000497993C9JUZ6

Expression (GTEx)

0
5
10
15
20
25
30
35
40

Protein levels (Protein atlas)

Not detected
Low
Medium
High

References

Pubmed IDYearTitleCitations
224642532012Identification of IRF8, TMEM39A, and IKZF3-ZPBP2 as susceptibility loci for systemic lupus erythematosus in a large-scale multiracial replication study.60
200075042010Comprehensive follow-up of the first genome-wide association study of multiple sclerosis identifies KIF21B and TMEM39A as susceptibility loci.43
201983152010Association of genetic variants with hemorrhagic stroke in Japanese individuals.11
221942142012Replication study of 10 genes showing evidence for association with multiple sclerosis: validation of TMEM39A, IL12B and CBLB [correction of CLBL] genes.11
198512962010Assessment of a polymorphism of SDK1 with hypertension in Japanese Individuals.3
284273602017Association of novel polymorphisms in TMEM39A gene with systemic lupus erythematosus in a Chinese Han population.1
284445022017Preliminary Study on the Role of TMEM39A Gene in Multiple Sclerosis.1
315532332019Genetic Variants in TMEM39A Gene Are Associated with Autoimmune Thyroid Diseases.0

Citation

Dessen P

TMEM39A (transmembrane protein 39A)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/74939/tmem39a