Atlas of Genetics and Cytogenetics in Oncology and Haematology

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TMEM9B-AS1 (TMEM9B antisense RNA 1)

Identity

Alias (NCBI)C11orf18
HGNC (Hugo) TMEM9B-AS1
HGNC Previous nameC11orf18
HGNC Previous namechromosome 11 open reading frame 18
 TMEM9B antisense RNA 1 (non-protein coding)
LocusID (NCBI) 493900
Atlas_Id 74998
Location 11p15.4  [Link to chromosome band 11p15]
Location_base_pair Starts at 8964675 and ends at 8976283 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)TMEM9B-AS1   19230
Cards
Entrez_Gene (NCBI)TMEM9B-AS1  493900  TMEM9B antisense RNA 1
AliasesC11orf18
GeneCards (Weizmann)TMEM9B-AS1
Ensembl hg19 (Hinxton)ENSG00000254860 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000254860 [Gene_View]  ENSG00000254860 [Sequence]  chr11:8964675-8976283 [Contig_View]  TMEM9B-AS1 [Vega]
ICGC DataPortalENSG00000254860
TCGA cBioPortalTMEM9B-AS1
AceView (NCBI)TMEM9B-AS1
Genatlas (Paris)TMEM9B-AS1
WikiGenes493900
SOURCE (Princeton)TMEM9B-AS1
Genetics Home Reference (NIH)TMEM9B-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)TMEM9B-AS1  -     chr11:8964675-8976283 +  11p15.4   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMEM9B-AS1  -     11p15.4   [Description]    (hg19-Feb_2009)
GoldenPathTMEM9B-AS1 - 11p15.4 [CytoView hg19]  TMEM9B-AS1 - 11p15.4 [CytoView hg38]
ImmunoBaseENSG00000254860
genome Data Viewer NCBITMEM9B-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA339546 BM724201 DA631400
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMEM9B-AS1
Alternative Splicing GalleryENSG00000254860
Gene ExpressionTMEM9B-AS1 [ NCBI-GEO ]   TMEM9B-AS1 [ EBI - ARRAY_EXPRESS ]   TMEM9B-AS1 [ SEEK ]   TMEM9B-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)TMEM9B-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of TMEM9B-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)493900
GTEX Portal (Tissue expression)TMEM9B-AS1
Human Protein AtlasENSG00000254860-TMEM9B-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMEM9B-AS1
DMDM Disease mutations493900
Blocks (Seattle)TMEM9B-AS1
Human Protein Atlas [tissue]ENSG00000254860-TMEM9B-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000254860
BioGRIDTMEM9B-AS1
STRING (EMBL)TMEM9B-AS1
ZODIACTMEM9B-AS1
Ontologies - Pathways
Huge Navigator TMEM9B-AS1 [HugePedia]
snp3D : Map Gene to Disease493900
BioCentury BCIQTMEM9B-AS1
ClinGenTMEM9B-AS1
Clinical trials, drugs, therapy
Protein Interactions : CTD493900
Pharm GKB GenePA134969638
Clinical trialTMEM9B-AS1
Miscellaneous
canSAR (ICR)TMEM9B-AS1 (select the gene name)
HarmonizomeTMEM9B-AS1
DataMed IndexTMEM9B-AS1
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMEM9B-AS1
EVEXTMEM9B-AS1
GoPubMedTMEM9B-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Aug 22 19:38:28 CEST 2020
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