Atlas of Genetics and Cytogenetics in Oncology and Haematology

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TMSB4XP1 (TMSB4X pseudogene 1)

Identity

Alias_namesTMSL1
thymosin-like 1
thymosin-like 1 (pseudogene)
Other alias
HGNC (Hugo) TMSB4XP1
LocusID (NCBI) 7115
Atlas_Id 75019
Location 1p34.2  [Link to chromosome band 1p34]
Location_base_pair Starts at 42499491 and ends at 42500278 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)TMSB4XP1   11883
Cards
Entrez_Gene (NCBI)TMSB4XP1  7115  TMSB4X pseudogene 1
AliasesTMSL1
GeneCards (Weizmann)TMSB4XP1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr1:42499491-42500278 [Contig_View]  TMSB4XP1 [Vega]
TCGA cBioPortalTMSB4XP1
AceView (NCBI)TMSB4XP1
Genatlas (Paris)TMSB4XP1
WikiGenes7115
SOURCE (Princeton)TMSB4XP1
Genetics Home Reference (NIH)TMSB4XP1
Genomic and cartography
GoldenPath hg38 (UCSC)TMSB4XP1  -     chr1:42499491-42500278 -  1p34.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TMSB4XP1  -     1p34.2   [Description]    (hg19-Feb_2009)
GoldenPathTMSB4XP1 - 1p34.2 [CytoView hg19]  TMSB4XP1 - 1p34.2 [CytoView hg38]
Mapping of homologs : NCBITMSB4XP1 [Mapview hg19]  TMSB4XP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC090885 BC101199 BC101200
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TMSB4XP1
Cluster EST : UnigeneHs.655548 [ NCBI ]
CGAP (NCI)Hs.655548
Gene ExpressionTMSB4XP1 [ NCBI-GEO ]   TMSB4XP1 [ EBI - ARRAY_EXPRESS ]   TMSB4XP1 [ SEEK ]   TMSB4XP1 [ MEM ]
Gene Expression Viewer (FireBrowse)TMSB4XP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)7115
GTEX Portal (Tissue expression)TMSB4XP1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TMSB4XP1
DMDM Disease mutations7115
Blocks (Seattle)TMSB4XP1
HPRD10271
IPIIPI00816288   
Protein Interaction databases
BioGRIDTMSB4XP1
STRING (EMBL)TMSB4XP1
ZODIACTMSB4XP1
Ontologies - Pathways
Huge Navigator TMSB4XP1 [HugePedia]
snp3D : Map Gene to Disease7115
BioCentury BCIQTMSB4XP1
ClinGenTMSB4XP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7115
Chemical/Pharm GKB GenePA36583
Clinical trialTMSB4XP1
Miscellaneous
canSAR (ICR)TMSB4XP1 (select the gene name)
DataMed IndexTMSB4XP1
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTMSB4XP1
EVEXTMSB4XP1
GoPubMedTMSB4XP1
iHOPTMSB4XP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 16:10:54 CEST 2019
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