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TPRG1-AS2 (TPRG1 antisense RNA 2)

Identity

Alias_namesTPRG1 antisense RNA 2 (non-protein coding)
Other alias-
HGNC (Hugo) TPRG1-AS2
LocusID (NCBI) 100874027
Atlas_Id 75081
Location 3q28  [Link to chromosome band 3q28]
Location_base_pair Starts at 189238686 and ends at 189240594 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)TPRG1-AS2   41062
Cards
Entrez_Gene (NCBI)TPRG1-AS2  100874027  TPRG1 antisense RNA 2
Aliases
GeneCards (Weizmann)TPRG1-AS2
Ensembl hg19 (Hinxton)ENSG00000230115 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000230115 [Gene_View]  ENSG00000230115 [Sequence]  chr3:189238686-189240594 [Contig_View]  TPRG1-AS2 [Vega]
ICGC DataPortalENSG00000230115
TCGA cBioPortalTPRG1-AS2
AceView (NCBI)TPRG1-AS2
Genatlas (Paris)TPRG1-AS2
WikiGenes100874027
SOURCE (Princeton)TPRG1-AS2
Genetics Home Reference (NIH)TPRG1-AS2
Genomic and cartography
GoldenPath hg38 (UCSC)TPRG1-AS2  -     chr3:189238686-189240594 -  3q28   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TPRG1-AS2  -     3q28   [Description]    (hg19-Feb_2009)
GoldenPathTPRG1-AS2 - 3q28 [CytoView hg19]  TPRG1-AS2 - 3q28 [CytoView hg38]
ImmunoBaseENSG00000230115
Mapping of homologs : NCBITPRG1-AS2 [Mapview hg19]  TPRG1-AS2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BG213396
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TPRG1-AS2
Cluster EST : UnigeneHs.616080 [ NCBI ]
CGAP (NCI)Hs.616080
Alternative Splicing GalleryENSG00000230115
Gene ExpressionTPRG1-AS2 [ NCBI-GEO ]   TPRG1-AS2 [ EBI - ARRAY_EXPRESS ]   TPRG1-AS2 [ SEEK ]   TPRG1-AS2 [ MEM ]
Gene Expression Viewer (FireBrowse)TPRG1-AS2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100874027
GTEX Portal (Tissue expression)TPRG1-AS2
Human Protein AtlasENSG00000230115-TPRG1-AS2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TPRG1-AS2
DMDM Disease mutations100874027
Blocks (Seattle)TPRG1-AS2
Human Protein Atlas [tissue]ENSG00000230115-TPRG1-AS2 [tissue]
Protein Interaction databases
FunCoupENSG00000230115
BioGRIDTPRG1-AS2
STRING (EMBL)TPRG1-AS2
ZODIACTPRG1-AS2
Ontologies - Pathways
Huge Navigator TPRG1-AS2 [HugePedia]
snp3D : Map Gene to Disease100874027
BioCentury BCIQTPRG1-AS2
ClinGenTPRG1-AS2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100874027
Clinical trialTPRG1-AS2
Miscellaneous
canSAR (ICR)TPRG1-AS2 (select the gene name)
DataMed IndexTPRG1-AS2
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTPRG1-AS2
EVEXTPRG1-AS2
GoPubMedTPRG1-AS2
iHOPTPRG1-AS2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 16:11:06 CEST 2019
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