Atlas of Genetics and Cytogenetics in Oncology and Haematology

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TPTEP2-CSNK1E (TPTEP2-CSNK1E readthrough)

Identity

Other aliasLOC400927-CSNK1E
HGNC (Hugo) TPTEP2-CSNK1E
LocusID (NCBI) 102800317
Atlas_Id 80639
Location 22q13.1  [Link to chromosome band 22q13]
Location_base_pair Starts at 38290691 and ends at 38398522 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

External links

Nomenclature
HGNC (Hugo)TPTEP2-CSNK1E   53829
Cards
Entrez_Gene (NCBI)TPTEP2-CSNK1E  102800317  TPTEP2-CSNK1E readthrough
AliasesLOC400927-CSNK1E
GeneCards (Weizmann)TPTEP2-CSNK1E
Ensembl hg19 (Hinxton)ENSG00000283900 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000283900 [Gene_View]  ENSG00000283900 [Sequence]  chr22:38290691-38398522 [Contig_View]  TPTEP2-CSNK1E [Vega]
ICGC DataPortalENSG00000283900
TCGA cBioPortalTPTEP2-CSNK1E
AceView (NCBI)TPTEP2-CSNK1E
Genatlas (Paris)TPTEP2-CSNK1E
WikiGenes102800317
SOURCE (Princeton)TPTEP2-CSNK1E
Genetics Home Reference (NIH)TPTEP2-CSNK1E
Genomic and cartography
GoldenPath hg38 (UCSC)TPTEP2-CSNK1E  -     chr22:38290691-38398522 -  22q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TPTEP2-CSNK1E  -     22q13.1   [Description]    (hg19-Feb_2009)
GoldenPathTPTEP2-CSNK1E - 22q13.1 [CytoView hg19]  TPTEP2-CSNK1E - 22q13.1 [CytoView hg38]
ImmunoBaseENSG00000283900
Mapping of homologs : NCBITPTEP2-CSNK1E [Mapview hg19]  TPTEP2-CSNK1E [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK092269 AK310303
RefSeq transcript (Entrez)NM_001289912
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TPTEP2-CSNK1E
Cluster EST : UnigeneHs.720223 [ NCBI ]
CGAP (NCI)Hs.720223
Alternative Splicing GalleryENSG00000283900
Gene ExpressionTPTEP2-CSNK1E [ NCBI-GEO ]   TPTEP2-CSNK1E [ EBI - ARRAY_EXPRESS ]   TPTEP2-CSNK1E [ SEEK ]   TPTEP2-CSNK1E [ MEM ]
Gene Expression Viewer (FireBrowse)TPTEP2-CSNK1E [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102800317
GTEX Portal (Tissue expression)TPTEP2-CSNK1E
Human Protein AtlasENSG00000283900-TPTEP2-CSNK1E [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TPTEP2-CSNK1E
DMDM Disease mutations102800317
Blocks (Seattle)TPTEP2-CSNK1E
Human Protein Atlas [tissue]ENSG00000283900-TPTEP2-CSNK1E [tissue]
Protein Interaction databases
FunCoupENSG00000283900
BioGRIDTPTEP2-CSNK1E
STRING (EMBL)TPTEP2-CSNK1E
ZODIACTPTEP2-CSNK1E
Ontologies - Pathways
Huge Navigator TPTEP2-CSNK1E [HugePedia]
snp3D : Map Gene to Disease102800317
BioCentury BCIQTPTEP2-CSNK1E
ClinGenTPTEP2-CSNK1E
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102800317
Clinical trialTPTEP2-CSNK1E
Miscellaneous
canSAR (ICR)TPTEP2-CSNK1E (select the gene name)
DataMed IndexTPTEP2-CSNK1E
Probes
Litterature
PubMed42 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTPTEP2-CSNK1E
EVEXTPTEP2-CSNK1E
GoPubMedTPTEP2-CSNK1E
iHOPTPTEP2-CSNK1E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Aug 12 16:54:47 CEST 2019
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