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TPTEP2 (TPTE pseudogene 2)

Identity

Other aliasZ98749.2
HGNC (Hugo) TPTEP2
LocusID (NCBI) 400927
Atlas_Id 80448
Location 22q13.1  [Link to chromosome band 22q13]
Location_base_pair Starts at 38344665 and ends at 38398926 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TPTEP2   53828
Cards
Entrez_Gene (NCBI)TPTEP2  400927  TPTE pseudogene 2
AliasesZ98749.2
GeneCards (Weizmann)TPTEP2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr22:38344665-38398926 [Contig_View]  TPTEP2 [Vega]
TCGA cBioPortalTPTEP2
AceView (NCBI)TPTEP2
Genatlas (Paris)TPTEP2
WikiGenes400927
SOURCE (Princeton)TPTEP2
Genetics Home Reference (NIH)TPTEP2
Genomic and cartography
GoldenPath hg38 (UCSC)TPTEP2  -     chr22:38344665-38398926 -  22q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TPTEP2  -     22q13.1   [Description]    (hg19-Feb_2009)
GoldenPathTPTEP2 - 22q13.1 [CytoView hg19]  TPTEP2 - 22q13.1 [CytoView hg38]
Mapping of homologs : NCBITPTEP2 [Mapview hg19]  TPTEP2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK124064 AK307225 BI669165 CN357790
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TPTEP2
Cluster EST : UnigeneHs.720223 [ NCBI ]
CGAP (NCI)Hs.720223
Gene ExpressionTPTEP2 [ NCBI-GEO ]   TPTEP2 [ EBI - ARRAY_EXPRESS ]   TPTEP2 [ SEEK ]   TPTEP2 [ MEM ]
Gene Expression Viewer (FireBrowse)TPTEP2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)400927
GTEX Portal (Tissue expression)TPTEP2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TPTEP2
DMDM Disease mutations400927
Blocks (Seattle)TPTEP2
Protein Interaction databases
BioGRIDTPTEP2
STRING (EMBL)TPTEP2
ZODIACTPTEP2
Ontologies - Pathways
Huge Navigator TPTEP2 [HugePedia]
snp3D : Map Gene to Disease400927
BioCentury BCIQTPTEP2
ClinGenTPTEP2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400927
Clinical trialTPTEP2
Miscellaneous
canSAR (ICR)TPTEP2 (select the gene name)
DataMed IndexTPTEP2
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTPTEP2
EVEXTPTEP2
GoPubMedTPTEP2
iHOPTPTEP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 16:11:08 CEST 2019

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