| Nomenclature |
HGNC (Hugo) | TRBC1 12156 |
| Cards |
Entrez_Gene (NCBI) | TRBC1 28639 T cell receptor beta constant 1 |
Aliases | BV05S1J2.2; TCRB; TCRBC1 |
GeneCards (Weizmann) | TRBC1 |
Ensembl hg19 (Hinxton) | [Gene_View] |
Ensembl hg38 (Hinxton) | [Gene_View]   [Sequence] chr7_KI270803v1_alt:282976-816341 [Contig_View] TRBC1 [Vega] |
TCGA cBioPortal | TRBC1 |
AceView (NCBI) | TRBC1 |
Genatlas (Paris) | TRBC1 |
WikiGenes | 28639 |
SOURCE (Princeton) | TRBC1 |
Genetics Home Reference (NIH) | TRBC1 |
| Genomic and cartography |
GoldenPath hg38 (UCSC) | TRBC1 - chr7_KI270803v1_alt:282976-816341 + 7_KI270803v1_alt [Description] (hg38-Dec_2013) |
GoldenPath hg19 (UCSC) | TRBC1 - 7_KI270803v1_alt [Description] (hg19-Feb_2009) |
GoldenPath | TRBC1 - 7_KI270803v1_alt [CytoView hg19] TRBC1 - 7_KI270803v1_alt [CytoView hg38] |
Mapping of homologs : NCBI | TRBC1 [Mapview hg19] TRBC1 [Mapview hg38] |
OMIM | 186930 |
| Gene and transcription |
Genbank (Entrez) | BC030533 |
RefSeq transcript (Entrez) | |
RefSeq genomic (Entrez) | NC_000007 NG_001333 NT_187562 |
Consensus coding sequences : CCDS (NCBI) | TRBC1 |
Cluster EST : Unigene | Hs.382212 [ NCBI ] |
CGAP (NCI) | Hs.382212 |
Gene Expression | TRBC1 [ NCBI-GEO ] TRBC1 [ EBI - ARRAY_EXPRESS ]
TRBC1 [ SEEK ] TRBC1 [ MEM ] |
Gene Expression Viewer (FireBrowse) | TRBC1 [ Firebrowse - Broad ] |
SOURCE (Princeton) | Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60] |
Genevestigator | Expression in : [tissues]  [cell-lines]  [cancer]  [perturbations]   |
BioGPS (Tissue expression) | 28639 |
GTEX Portal (Tissue expression) | TRBC1 |
| Protein : pattern, domain, 3D structure |
UniProt/SwissProt | P01850 [function] [subcellular_location] [family_and_domains] [pathology_and_biotech] [ptm_processing] [expression] [interaction] |
NextProt | P01850 [Sequence] [Exons] [Medical] [Publications] |
With graphics : InterPro | P01850 |
Splice isoforms : SwissVar | P01850 |
PhosPhoSitePlus | P01850 |
Domaine pattern : Prosite (Expaxy) | IG_LIKE (PS50835) |
Domains : Interpro (EBI) | Ig-like_dom Ig-like_dom_sf Ig-like_fold Ig_C1-set |
Domain families : Pfam (Sanger) | C1-set (PF07654) |
Domain families : Pfam (NCBI) | pfam07654 |
Domain families : Smart (EMBL) | IGc1 (SM00407) |
Conserved Domain (NCBI) | TRBC1 |
DMDM Disease mutations | 28639 |
Blocks (Seattle) | TRBC1 |
PDB (RSDB) | 1AO7 1FYT 1J8H 1KGC 1KTK 1MI5 1OGA 1YMM 1ZGL 2AK4 2AXH 2BNQ 2BNR 2BNU 2CDE 2CDF 2CDG 2ESV 2F53 2F54 2GJ6 2IAL 2IAM 2IAN 2NTS 2NW2 2NX5 2P5E 2P5W 2PO6 2PYE 2PYF 2VLJ 2VLK 2VLM 2VLR 2XN9 2XNA 3ARB 3ARD 3ARE 3ARF 3ARG 3D39 3D3V 3DX9 3DXA 3FFC 3HE6 3HG1 3KPR 3KPS 3O4L 3TN0 4G8E 4G8F 4GG6 4GG8 4IIQ 4JFD 4JFE 4JFF 4JFH 4JRX 4JRY 4L4T 4L4V 4L9L 4LCC 4LCW 4MJI 4MNQ 4NQC 4NQD 4NQE 4OZF 4OZG 4OZH 4OZI 4P46 4PRH 4PRI 4PRP 4X6B 4X6C 4X6D 4ZDH |
PDB Europe | 1AO7 1FYT 1J8H 1KGC 1KTK 1MI5 1OGA 1YMM 1ZGL 2AK4 2AXH 2BNQ 2BNR 2BNU 2CDE 2CDF 2CDG 2ESV 2F53 2F54 2GJ6 2IAL 2IAM 2IAN 2NTS 2NW2 2NX5 2P5E 2P5W 2PO6 2PYE 2PYF 2VLJ 2VLK 2VLM 2VLR 2XN9 2XNA 3ARB 3ARD 3ARE 3ARF 3ARG 3D39 3D3V 3DX9 3DXA 3FFC 3HE6 3HG1 3KPR 3KPS 3O4L 3TN0 4G8E 4G8F 4GG6 4GG8 4IIQ 4JFD 4JFE 4JFF 4JFH 4JRX 4JRY 4L4T 4L4V 4L9L 4LCC 4LCW 4MJI 4MNQ 4NQC 4NQD 4NQE 4OZF 4OZG 4OZH 4OZI 4P46 4PRH 4PRI 4PRP 4X6B 4X6C 4X6D 4ZDH |
PDB (PDBSum) | 1AO7 1FYT 1J8H 1KGC 1KTK 1MI5 1OGA 1YMM 1ZGL 2AK4 2AXH 2BNQ 2BNR 2BNU 2CDE 2CDF 2CDG 2ESV 2F53 2F54 2GJ6 2IAL 2IAM 2IAN 2NTS 2NW2 2NX5 2P5E 2P5W 2PO6 2PYE 2PYF 2VLJ 2VLK 2VLM 2VLR 2XN9 2XNA 3ARB 3ARD 3ARE 3ARF 3ARG 3D39 3D3V 3DX9 3DXA 3FFC 3HE6 3HG1 3KPR 3KPS 3O4L 3TN0 4G8E 4G8F 4GG6 4GG8 4IIQ 4JFD 4JFE 4JFF 4JFH 4JRX 4JRY 4L4T 4L4V 4L9L 4LCC 4LCW 4MJI 4MNQ 4NQC 4NQD 4NQE 4OZF 4OZG 4OZH 4OZI 4P46 4PRH 4PRI 4PRP 4X6B 4X6C 4X6D 4ZDH |
PDB (IMB) | 1AO7 1FYT 1J8H 1KGC 1KTK 1MI5 1OGA 1YMM 1ZGL 2AK4 2AXH 2BNQ 2BNR 2BNU 2CDE 2CDF 2CDG 2ESV 2F53 2F54 2GJ6 2IAL 2IAM 2IAN 2NTS 2NW2 2NX5 2P5E 2P5W 2PO6 2PYE 2PYF 2VLJ 2VLK 2VLM 2VLR 2XN9 2XNA 3ARB 3ARD 3ARE 3ARF 3ARG 3D39 3D3V 3DX9 3DXA 3FFC 3HE6 3HG1 3KPR 3KPS 3O4L 3TN0 4G8E 4G8F 4GG6 4GG8 4IIQ 4JFD 4JFE 4JFF 4JFH 4JRX 4JRY 4L4T 4L4V 4L9L 4LCC 4LCW 4MJI 4MNQ 4NQC 4NQD 4NQE 4OZF 4OZG 4OZH 4OZI 4P46 4PRH 4PRI 4PRP 4X6B 4X6C 4X6D 4ZDH |
Structural Biology KnowledgeBase | 1AO7 1FYT 1J8H 1KGC 1KTK 1MI5 1OGA 1YMM 1ZGL 2AK4 2AXH 2BNQ 2BNR 2BNU 2CDE 2CDF 2CDG 2ESV 2F53 2F54 2GJ6 2IAL 2IAM 2IAN 2NTS 2NW2 2NX5 2P5E 2P5W 2PO6 2PYE 2PYF 2VLJ 2VLK 2VLM 2VLR 2XN9 2XNA 3ARB 3ARD 3ARE 3ARF 3ARG 3D39 3D3V 3DX9 3DXA 3FFC 3HE6 3HG1 3KPR 3KPS 3O4L 3TN0 4G8E 4G8F 4GG6 4GG8 4IIQ 4JFD 4JFE 4JFF 4JFH 4JRX 4JRY 4L4T 4L4V 4L9L 4LCC 4LCW 4MJI 4MNQ 4NQC 4NQD 4NQE 4OZF 4OZG 4OZH 4OZI 4P46 4PRH 4PRI 4PRP 4X6B 4X6C 4X6D 4ZDH |
SCOP (Structural Classification of Proteins) | 1AO7 1FYT 1J8H 1KGC 1KTK 1MI5 1OGA 1YMM 1ZGL 2AK4 2AXH 2BNQ 2BNR 2BNU 2CDE 2CDF 2CDG 2ESV 2F53 2F54 2GJ6 2IAL 2IAM 2IAN 2NTS 2NW2 2NX5 2P5E 2P5W 2PO6 2PYE 2PYF 2VLJ 2VLK 2VLM 2VLR 2XN9 2XNA 3ARB 3ARD 3ARE 3ARF 3ARG 3D39 3D3V 3DX9 3DXA 3FFC 3HE6 3HG1 3KPR 3KPS 3O4L 3TN0 4G8E 4G8F 4GG6 4GG8 4IIQ 4JFD 4JFE 4JFF 4JFH 4JRX 4JRY 4L4T 4L4V 4L9L 4LCC 4LCW 4MJI 4MNQ 4NQC 4NQD 4NQE 4OZF 4OZG 4OZH 4OZI 4P46 4PRH 4PRI 4PRP 4X6B 4X6C 4X6D 4ZDH |
CATH (Classification of proteins structures) | 1AO7 1FYT 1J8H 1KGC 1KTK 1MI5 1OGA 1YMM 1ZGL 2AK4 2AXH 2BNQ 2BNR 2BNU 2CDE 2CDF 2CDG 2ESV 2F53 2F54 2GJ6 2IAL 2IAM 2IAN 2NTS 2NW2 2NX5 2P5E 2P5W 2PO6 2PYE 2PYF 2VLJ 2VLK 2VLM 2VLR 2XN9 2XNA 3ARB 3ARD 3ARE 3ARF 3ARG 3D39 3D3V 3DX9 3DXA 3FFC 3HE6 3HG1 3KPR 3KPS 3O4L 3TN0 4G8E 4G8F 4GG6 4GG8 4IIQ 4JFD 4JFE 4JFF 4JFH 4JRX 4JRY 4L4T 4L4V 4L9L 4LCC 4LCW 4MJI 4MNQ 4NQC 4NQD 4NQE 4OZF 4OZG 4OZH 4OZI 4P46 4PRH 4PRI 4PRP 4X6B 4X6C 4X6D 4ZDH |
Superfamily | P01850 |
Peptide Atlas | P01850 |
| Protein Interaction databases |
DIP (DOE-UCLA) | P01850 |
IntAct (EBI) | P01850 |
BioGRID | TRBC1 |
STRING (EMBL) | TRBC1 |
ZODIAC | TRBC1 |
| Ontologies - Pathways |
QuickGO | P01850 |
Ontology : AmiGO | antigen binding plasma membrane phagocytosis, recognition phagocytosis, engulfment immune response complement activation, classical pathway external side of plasma membrane membrane integral component of membrane immunoglobulin receptor binding T cell receptor complex immunoglobulin complex, circulating defense response to bacterium innate immune response regulation of immune response T cell receptor signaling pathway B cell receptor signaling pathway positive regulation of B cell activation |
Ontology : EGO-EBI | antigen binding plasma membrane phagocytosis, recognition phagocytosis, engulfment immune response complement activation, classical pathway external side of plasma membrane membrane integral component of membrane immunoglobulin receptor binding T cell receptor complex immunoglobulin complex, circulating defense response to bacterium innate immune response regulation of immune response T cell receptor signaling pathway B cell receptor signaling pathway positive regulation of B cell activation |
NDEx Network | TRBC1 |
Atlas of Cancer Signalling Network | TRBC1 |
Wikipedia pathways | TRBC1 |
| Orthology - Evolution |
OrthoDB | 28639 |
Phylogenetic Trees/Animal Genes : TreeFam | TRBC1 |
HOGENOM | P01850 |
Homologs : HomoloGene | TRBC1 |
Homology/Alignments : Family Browser (UCSC) | TRBC1 |
| Gene fusions - Rearrangements |
Fusion : Quiver | TRBC1 |
| Polymorphisms : SNP and Copy number variants |
NCBI Variation Viewer | TRBC1 [hg38] |
dbSNP Single Nucleotide Polymorphism (NCBI) | TRBC1 |
dbVar | TRBC1 |
ClinVar | TRBC1 |
1000_Genomes | TRBC1 |
Exome Variant Server | TRBC1 |
Varsome Browser | TRBC1 |
Genetic variants : HAPMAP | 28639 |
Genomic Variants (DGV) | TRBC1 [DGVbeta] |
DECIPHER | TRBC1 [patients] [syndromes] [variants] [genes] |
CONAN: Copy Number Analysis | TRBC1 |
| Mutations |
ICGC Data Portal | TRBC1 |
TCGA Data Portal | TRBC1 |
Broad Tumor Portal | TRBC1 |
OASIS Portal | TRBC1 [ Somatic mutations - Copy number] |
Mutations and Diseases : HGMD | TRBC1 |
BioMuta | search TRBC1 |
DgiDB (Drug Gene Interaction Database) | TRBC1 |
DoCM (Curated mutations) | TRBC1 (select the gene name) |
CIViC (Clinical Interpretations of Variants in Cancer) | TRBC1 (select a term) |
intoGen | TRBC1 |
Cancer3D | TRBC1(select the gene name) |
Impact of mutations | [PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser] |
| Diseases |
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OMIM | 186930 |
Orphanet | |
DisGeNET | TRBC1 |
Medgen | TRBC1 |
Genetic Testing Registry | TRBC1
|
NextProt | P01850 [Medical] |
TSGene | 28639 |
GENETests | TRBC1 |
Target Validation | TRBC1 |
Huge Navigator |
TRBC1 [HugePedia] |
snp3D : Map Gene to Disease | 28639 |
BioCentury BCIQ | TRBC1 |
ClinGen | TRBC1 |
| Clinical trials, drugs, therapy |
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Chemical/Protein Interactions : CTD | 28639 |
Chemical/Pharm GKB Gene | PA36838 |
Clinical trial | TRBC1 |
| Miscellaneous |
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canSAR (ICR) | TRBC1 (select the gene name) |
DataMed Index | TRBC1 |
| Probes |
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| Litterature |
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PubMed | 12 Pubmed reference(s) in Entrez |
GeneRIFs | Gene References Into Functions (Entrez) |
CoreMine | TRBC1 |
EVEX | TRBC1 |
GoPubMed | TRBC1 |
iHOP | TRBC1 |