Atlas of Genetics and Cytogenetics in Oncology and Haematology


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TRBV20OR9-2 (T cell receptor beta variable 20/OR9-2 (non-functional))

Identity

Alias_namesTCRBV2O
TCRBV2O
Alias_symbol (synonym)TRBV20/OR9-2
TCRBV20S2
TCRBV2S2O
Other aliasCDR3
TCR
TCRB
TRB
HGNC (Hugo) TRBV20OR9-2
LocusID (NCBI) 6962
Atlas_Id 57817
Location 9p13.3  [Link to chromosome band 9p13]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)TRBV20OR9-2   12197
Cards
Entrez_Gene (NCBI)TRBV20OR9-2  6962  T cell receptor beta variable 20/OR9-2 (non-functional)
AliasesCDR3; TCR; TCRB; TCRBV20S2; 
TCRBV2O; TCRBV2S2O; TRB
GeneCards (Weizmann)TRBV20OR9-2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  TRBV20OR9-2 [Vega]
TCGA cBioPortalTRBV20OR9-2
AceView (NCBI)TRBV20OR9-2
Genatlas (Paris)TRBV20OR9-2
WikiGenes6962
SOURCE (Princeton)TRBV20OR9-2
Genetics Home Reference (NIH)TRBV20OR9-2
Genomic and cartography
GoldenPath hg38 (UCSC)TRBV20OR9-2  -  
GoldenPath hg19 (UCSC)TRBV20OR9-2  -  
GoldenPathTRBV20OR9-2 - [CytoView hg19]  TRBV20OR9-2 - [CytoView hg38]
Mapping of homologs : NCBITRBV20OR9-2 [Mapview hg19]  TRBV20OR9-2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY006120 AY006285 AY006316 AY751326 AY751328
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TRBV20OR9-2
Cluster EST : UnigeneHs.728330 [ NCBI ]
CGAP (NCI)Hs.728330
Gene ExpressionTRBV20OR9-2 [ NCBI-GEO ]   TRBV20OR9-2 [ EBI - ARRAY_EXPRESS ]   TRBV20OR9-2 [ SEEK ]   TRBV20OR9-2 [ MEM ]
Gene Expression Viewer (FireBrowse)TRBV20OR9-2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)6962
GTEX Portal (Tissue expression)TRBV20OR9-2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRBV20OR9-2
DMDM Disease mutations6962
Blocks (Seattle)TRBV20OR9-2
Protein Interaction databases
BioGRIDTRBV20OR9-2
STRING (EMBL)TRBV20OR9-2
ZODIACTRBV20OR9-2
Ontologies - Pathways
Huge Navigator TRBV20OR9-2 [HugePedia]
snp3D : Map Gene to Disease6962
BioCentury BCIQTRBV20OR9-2
ClinGenTRBV20OR9-2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD6962
Chemical/Pharm GKB GenePA36877
Clinical trialTRBV20OR9-2
Miscellaneous
canSAR (ICR)TRBV20OR9-2 (select the gene name)
DataMed IndexTRBV20OR9-2
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTRBV20OR9-2
EVEXTRBV20OR9-2
GoPubMedTRBV20OR9-2
iHOPTRBV20OR9-2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Nov 13 18:12:58 CET 2019

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