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TRIOBP (TRIO and F-actin binding protein)

Identity

Alias (NCBI)DFNB28
HRIHFB2122
TAP68
TARA
dJ37E16.4
HGNC (Hugo) TRIOBP
HGNC Alias symbHRIHFB2122
KIAA1662
Tara
TAP68
HGNC Previous nameDFNB28
LocusID (NCBI) 11078
Atlas_Id 55136
Location 22q13.1  [Link to chromosome band 22q13]
Location_base_pair Starts at 37746234 and ends at 37759956 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
AGAP1 (2q37.2) / TRIOBP (22q13.1)GGA1 (22q13.1) / TRIOBP (22q13.1)SH2B3 (12q24.12) / TRIOBP (22q13.1)
SIK3 (11q23.3) / TRIOBP (22q13.1)SYNGR2 (17q25.3) / TRIOBP (22q13.1)SYNPO (5q33.1) / TRIOBP (22q13.1)
TRIOBP (22q13.1) / LGALS1 (22q13.1)TRIOBP (22q13.1) / NDE1 (16p13.11)TRIOBP (22q13.1) / SLCO3A1 (15q26.1)
TRIOBP (22q13.1) / UNC13C (15q21.3)TRIOBP 22q13.1 / UNC13C 15q21.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)TRIOBP   17009
Cards
Entrez_Gene (NCBI)TRIOBP    TRIO and F-actin binding protein
AliasesDFNB28; HRIHFB2122; TAP68; TARA; 
dJ37E16.4
GeneCards (Weizmann)TRIOBP
Ensembl hg19 (Hinxton)ENSG00000100106 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000100106 [Gene_View]  ENSG00000100106 [Sequence]  chr22:37746234-37759956 [Contig_View]  TRIOBP [Vega]
ICGC DataPortalENSG00000100106
TCGA cBioPortalTRIOBP
AceView (NCBI)TRIOBP
Genatlas (Paris)TRIOBP
SOURCE (Princeton)TRIOBP
Genetics Home Reference (NIH)TRIOBP
Genomic and cartography
GoldenPath hg38 (UCSC)TRIOBP  -     chr22:37746234-37759956 +  22q13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TRIOBP  -     22q13.1   [Description]    (hg19-Feb_2009)
GoldenPathTRIOBP - 22q13.1 [CytoView hg19]  TRIOBP - 22q13.1 [CytoView hg38]
ImmunoBaseENSG00000100106
genome Data Viewer NCBITRIOBP [Mapview hg19]  
OMIM609761   609823   
Gene and transcription
Genbank (Entrez)AB015343 AF281030 AK096634 AL713698 AW444985
RefSeq transcript (Entrez)NM_001039141 NM_007032 NM_138632
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TRIOBP
Alternative Splicing GalleryENSG00000100106
Gene ExpressionTRIOBP [ NCBI-GEO ]   TRIOBP [ EBI - ARRAY_EXPRESS ]   TRIOBP [ SEEK ]   TRIOBP [ MEM ]
Gene Expression Viewer (FireBrowse)TRIOBP [ Firebrowse - Broad ]
GenevisibleExpression of TRIOBP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)11078
GTEX Portal (Tissue expression)TRIOBP
Human Protein AtlasENSG00000100106-TRIOBP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TRIOBP
Blocks (Seattle)TRIOBP
Human Protein Atlas [tissue]ENSG00000100106-TRIOBP [tissue]
HPRD11028
IPIIPI00413160   IPI00736522   IPI00741684   IPI00878035   IPI00878567   IPI00952918   IPI00382909   IPI00879297   IPI00332510   IPI00148768   IPI00880004   IPI00878205   IPI00877699   
Protein Interaction databases
BioGRIDTRIOBP
STRING (EMBL)TRIOBP
ZODIACTRIOBP
Ontologies - Pathways
Litterature
PubMed62 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXTRIOBP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Mar 25 19:50:59 CET 2021

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