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TSLP (thymic stromal lymphopoietin)

Identity

Other alias-
HGNC (Hugo) TSLP
LocusID (NCBI) 85480
Atlas_Id 51456
Location 5q22.1  [Link to chromosome band 5q22]
Location_base_pair Starts at 111073314 and ends at 111078024 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TSLP   30743
Cards
Entrez_Gene (NCBI)TSLP  85480  thymic stromal lymphopoietin
Aliases
GeneCards (Weizmann)TSLP
Ensembl hg19 (Hinxton)ENSG00000145777 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000145777 [Gene_View]  ENSG00000145777 [Sequence]  chr5:111073314-111078024 [Contig_View]  TSLP [Vega]
ICGC DataPortalENSG00000145777
TCGA cBioPortalTSLP
AceView (NCBI)TSLP
Genatlas (Paris)TSLP
WikiGenes85480
SOURCE (Princeton)TSLP
Genetics Home Reference (NIH)TSLP
Genomic and cartography
GoldenPath hg38 (UCSC)TSLP  -     chr5:111073314-111078024 +  5q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TSLP  -     5q22.1   [Description]    (hg19-Feb_2009)
GoldenPathTSLP - 5q22.1 [CytoView hg19]  TSLP - 5q22.1 [CytoView hg38]
ImmunoBaseENSG00000145777
Mapping of homologs : NCBITSLP [Mapview hg19]  TSLP [Mapview hg38]
OMIM607003   
Gene and transcription
Genbank (Entrez)AF338732 AL833421 AY037115 BC016720 BC022894
RefSeq transcript (Entrez)NM_033035 NM_138551
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TSLP
Alternative Splicing GalleryENSG00000145777
Gene ExpressionTSLP [ NCBI-GEO ]   TSLP [ EBI - ARRAY_EXPRESS ]   TSLP [ SEEK ]   TSLP [ MEM ]
Gene Expression Viewer (FireBrowse)TSLP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)85480
GTEX Portal (Tissue expression)TSLP
Human Protein AtlasENSG00000145777-TSLP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TSLP
DMDM Disease mutations85480
Blocks (Seattle)TSLP
Human Protein Atlas [tissue]ENSG00000145777-TSLP [tissue]
HPRD06108
IPIIPI00413782   IPI00217207   IPI00977467   
Protein Interaction databases
FunCoupENSG00000145777
BioGRIDTSLP
STRING (EMBL)TSLP
ZODIACTSLP
Ontologies - Pathways
Huge Navigator TSLP [HugePedia]
snp3D : Map Gene to Disease85480
BioCentury BCIQTSLP
ClinGenTSLP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD85480
Chemical/Pharm GKB GenePA162407159
Clinical trialTSLP
Miscellaneous
canSAR (ICR)TSLP (select the gene name)
DataMed IndexTSLP
Probes
Litterature
PubMed264 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTSLP
EVEXTSLP
GoPubMedTSLP
iHOPTSLP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Feb 19 17:14:39 CET 2020

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