Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

TTTY11 (testis-specific transcript, Y-linked 11)

Identity

Alias (NCBI)NCRNA00134
TTY11
HGNC (Hugo) TTTY11
HGNC Alias symbTTY11
NCRNA00134
HGNC Alias namenon-protein coding RNA 134
HGNC Previous nametestis-specific transcript, Y-linked 11
LocusID (NCBI) 83866
Atlas_Id 75323
Location Yp11.2  [Link to chromosome band Yp11]
Location_base_pair Starts at 8783320 and ends at 8817382 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TTTY11   18492
Cards
Entrez_Gene (NCBI)TTTY11  83866  testis-specific transcript, Y-linked 11
AliasesNCRNA00134; TTY11
GeneCards (Weizmann)TTTY11
Ensembl hg19 (Hinxton)ENSG00000180910 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000180910 [Gene_View]  ENSG00000180910 [Sequence]  chrY:8783320-8817382 [Contig_View]  TTTY11 [Vega]
ICGC DataPortalENSG00000180910
TCGA cBioPortalTTTY11
AceView (NCBI)TTTY11
Genatlas (Paris)TTTY11
WikiGenes83866
SOURCE (Princeton)TTTY11
Genetics Home Reference (NIH)TTTY11
Genomic and cartography
GoldenPath hg38 (UCSC)TTTY11  -     chrY:8783320-8817382 -  Yp11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTTY11  -     Yp11.2   [Description]    (hg19-Feb_2009)
GoldenPathTTTY11 - Yp11.2 [CytoView hg19]  TTTY11 - Yp11.2 [CytoView hg38]
ImmunoBaseENSG00000180910
genome Data Viewer NCBITTTY11 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TTTY11
Alternative Splicing GalleryENSG00000180910
Gene ExpressionTTTY11 [ NCBI-GEO ]   TTTY11 [ EBI - ARRAY_EXPRESS ]   TTTY11 [ SEEK ]   TTTY11 [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY11 [ Firebrowse - Broad ]
GenevisibleExpression of TTTY11 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)83866
GTEX Portal (Tissue expression)TTTY11
Human Protein AtlasENSG00000180910-TTTY11 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY11
DMDM Disease mutations83866
Blocks (Seattle)TTTY11
Human Protein Atlas [tissue]ENSG00000180910-TTTY11 [tissue]
IPIIPI00011147   
Protein Interaction databases
FunCoupENSG00000180910
BioGRIDTTTY11
STRING (EMBL)TTTY11
ZODIACTTTY11
Ontologies - Pathways
Huge Navigator TTTY11 [HugePedia]
snp3D : Map Gene to Disease83866
BioCentury BCIQTTTY11
ClinGenTTTY11
Clinical trials, drugs, therapy
Protein Interactions : CTD83866
Pharm GKB GenePA38555
Clinical trialTTTY11
Miscellaneous
canSAR (ICR)TTTY11 (select the gene name)
HarmonizomeTTTY11
DataMed IndexTTTY11
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTTTY11
EVEXTTTY11
GoPubMedTTTY11
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 16:34:27 CEST 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.