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TTTY17C (testis-specific transcript, Y-linked 17C)

Identity

Alias (NCBI)NCRNA00142
HGNC (Hugo) TTTY17C
HGNC Alias symbNCRNA00142
HGNC Alias namenon-protein coding RNA 142
HGNC Previous nametestis-specific transcript, Y-linked 17C
LocusID (NCBI) 474152
Atlas_Id 75330
Location Yq11.223  [Link to chromosome band Yq11]
Location_base_pair Starts at 22851584 and ends at 22852715 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TTTY17C   31890
Cards
Entrez_Gene (NCBI)TTTY17C  474152  testis-specific transcript, Y-linked 17C
AliasesNCRNA00142
GeneCards (Weizmann)TTTY17C
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chrY:22851584-22852715 [Contig_View]  TTTY17C [Vega]
TCGA cBioPortalTTTY17C
AceView (NCBI)TTTY17C
Genatlas (Paris)TTTY17C
WikiGenes474152
SOURCE (Princeton)TTTY17C
Genetics Home Reference (NIH)TTTY17C
Genomic and cartography
GoldenPath hg38 (UCSC)TTTY17C  -     chrY:22851584-22852715 +  Yq11.223   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTTY17C  -     Yq11.223   [Description]    (hg19-Feb_2009)
GoldenPathTTTY17C - Yq11.223 [CytoView hg19]  TTTY17C - Yq11.223 [CytoView hg38]
genome Data Viewer NCBITTTY17C [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TTTY17C
Gene ExpressionTTTY17C [ NCBI-GEO ]   TTTY17C [ EBI - ARRAY_EXPRESS ]   TTTY17C [ SEEK ]   TTTY17C [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY17C [ Firebrowse - Broad ]
GenevisibleExpression of TTTY17C in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)474152
GTEX Portal (Tissue expression)TTTY17C
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY17C
DMDM Disease mutations474152
Blocks (Seattle)TTTY17C
Protein Interaction databases
BioGRIDTTTY17C
STRING (EMBL)TTTY17C
ZODIACTTTY17C
Ontologies - Pathways
Huge Navigator TTTY17C [HugePedia]
snp3D : Map Gene to Disease474152
BioCentury BCIQTTTY17C
ClinGenTTTY17C
Clinical trials, drugs, therapy
Protein Interactions : CTD474152
Pharm GKB GenePA134863151
Clinical trialTTTY17C
Miscellaneous
canSAR (ICR)TTTY17C (select the gene name)
HarmonizomeTTTY17C
DataMed IndexTTTY17C
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTTTY17C
EVEXTTTY17C
GoPubMedTTTY17C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 16:34:28 CEST 2020

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