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TTTY18 (testis-specific transcript, Y-linked 18)

Identity

Alias (NCBI)NCRNA00143
HGNC (Hugo) TTTY18
HGNC Alias symbNCRNA00143
HGNC Alias namenon-protein coding RNA 143
HGNC Previous nametestis-specific transcript, Y-linked 18
LocusID (NCBI) 252950
Atlas_Id 75331
Location Yp11.2  [Link to chromosome band Yp11]
Location_base_pair Starts at 8683370 and ends at 8683878 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TTTY18   18842
Cards
Entrez_Gene (NCBI)TTTY18  252950  testis-specific transcript, Y-linked 18
AliasesNCRNA00143
GeneCards (Weizmann)TTTY18
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chrY:8683370-8683878 [Contig_View]  TTTY18 [Vega]
TCGA cBioPortalTTTY18
AceView (NCBI)TTTY18
Genatlas (Paris)TTTY18
WikiGenes252950
SOURCE (Princeton)TTTY18
Genetics Home Reference (NIH)TTTY18
Genomic and cartography
GoldenPath hg38 (UCSC)TTTY18  -     chrY:8683370-8683878 -  Yp11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTTY18  -     Yp11.2   [Description]    (hg19-Feb_2009)
GoldenPathTTTY18 - Yp11.2 [CytoView hg19]  TTTY18 - Yp11.2 [CytoView hg38]
genome Data Viewer NCBITTTY18 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AF527830
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TTTY18
Gene ExpressionTTTY18 [ NCBI-GEO ]   TTTY18 [ EBI - ARRAY_EXPRESS ]   TTTY18 [ SEEK ]   TTTY18 [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY18 [ Firebrowse - Broad ]
GenevisibleExpression of TTTY18 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)252950
GTEX Portal (Tissue expression)TTTY18
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY18
DMDM Disease mutations252950
Blocks (Seattle)TTTY18
Protein Interaction databases
BioGRIDTTTY18
STRING (EMBL)TTTY18
ZODIACTTTY18
Ontologies - Pathways
Huge Navigator TTTY18 [HugePedia]
snp3D : Map Gene to Disease252950
BioCentury BCIQTTTY18
ClinGenTTTY18
Clinical trials, drugs, therapy
Protein Interactions : CTD252950
Pharm GKB GenePA38705
Clinical trialTTTY18
Miscellaneous
canSAR (ICR)TTTY18 (select the gene name)
HarmonizomeTTTY18
DataMed IndexTTTY18
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTTTY18
EVEXTTTY18
GoPubMedTTTY18
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 16:34:28 CEST 2020

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