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TTTY2 (testis-specific transcript, Y-linked 2)

Identity

Alias (NCBI)NCRNA00109
TTY2
lINC00109
HGNC (Hugo) TTTY2
HGNC Alias symbTTY2
lINC00109
HGNC Alias namelong intergenic non-protein coding RNA 109
HGNC Previous nametestis-specific transcript, Y-linked 2
LocusID (NCBI) 60439
Atlas_Id 75334
Location Yp11.2  [Link to chromosome band Yp11]
Location_base_pair Starts at 6406244 and ends at 6428444 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)TTTY2   14023
Cards
Entrez_Gene (NCBI)TTTY2  60439  testis-specific transcript, Y-linked 2
AliasesNCRNA00109; TTY2; lINC00109
GeneCards (Weizmann)TTTY2
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chrY:6406244-6428444 [Contig_View]  TTTY2 [Vega]
TCGA cBioPortalTTTY2
AceView (NCBI)TTTY2
Genatlas (Paris)TTTY2
WikiGenes60439
SOURCE (Princeton)TTTY2
Genetics Home Reference (NIH)TTTY2
Genomic and cartography
GoldenPath hg38 (UCSC)TTTY2  -     chrY:6406244-6428444 -  Yp11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)TTTY2  -     Yp11.2   [Description]    (hg19-Feb_2009)
GoldenPathTTTY2 - Yp11.2 [CytoView hg19]  TTTY2 - Yp11.2 [CytoView hg38]
genome Data Viewer NCBITTTY2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)DB449030
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)TTTY2
Gene ExpressionTTTY2 [ NCBI-GEO ]   TTTY2 [ EBI - ARRAY_EXPRESS ]   TTTY2 [ SEEK ]   TTTY2 [ MEM ]
Gene Expression Viewer (FireBrowse)TTTY2 [ Firebrowse - Broad ]
GenevisibleExpression of TTTY2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)60439
GTEX Portal (Tissue expression)TTTY2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)TTTY2
DMDM Disease mutations60439
Blocks (Seattle)TTTY2
Protein Interaction databases
BioGRIDTTTY2
STRING (EMBL)TTTY2
ZODIACTTTY2
Ontologies - Pathways
Huge Navigator TTTY2 [HugePedia]
snp3D : Map Gene to Disease60439
BioCentury BCIQTTTY2
ClinGenTTTY2
Clinical trials, drugs, therapy
Protein Interactions : CTD60439
Pharm GKB GenePA37836
Clinical trialTTTY2
Miscellaneous
canSAR (ICR)TTTY2 (select the gene name)
HarmonizomeTTTY2
DataMed IndexTTTY2
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineTTTY2
EVEXTTTY2
GoPubMedTTTY2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 16:34:29 CEST 2020

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