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UBR5-AS1 (UBR5 antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) UBR5-AS1
LocusID (NCBI) 101927221
Atlas_Id 67085
Location 8q22.3  [Link to chromosome band 8q22]
Location_base_pair Starts at 102239451 and ends at 102252174 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)UBR5-AS1   51661
Cards
Entrez_Gene (NCBI)UBR5-AS1  101927221  UBR5 antisense RNA 1
Aliases
GeneCards (Weizmann)UBR5-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr8:102239451-102252174 [Contig_View]  UBR5-AS1 [Vega]
TCGA cBioPortalUBR5-AS1
AceView (NCBI)UBR5-AS1
Genatlas (Paris)UBR5-AS1
WikiGenes101927221
SOURCE (Princeton)UBR5-AS1
Genetics Home Reference (NIH)UBR5-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)UBR5-AS1  -     chr8:102239451-102252174 +  8q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UBR5-AS1  -     8q22.3   [Description]    (hg19-Feb_2009)
GoldenPathUBR5-AS1 - 8q22.3 [CytoView hg19]  UBR5-AS1 - 8q22.3 [CytoView hg38]
genome Data Viewer NCBIUBR5-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK095151 BQ082210 DA677213
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UBR5-AS1
Gene ExpressionUBR5-AS1 [ NCBI-GEO ]   UBR5-AS1 [ EBI - ARRAY_EXPRESS ]   UBR5-AS1 [ SEEK ]   UBR5-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)UBR5-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of UBR5-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)101927221
GTEX Portal (Tissue expression)UBR5-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)UBR5-AS1
DMDM Disease mutations101927221
Blocks (Seattle)UBR5-AS1
Protein Interaction databases
BioGRIDUBR5-AS1
STRING (EMBL)UBR5-AS1
ZODIACUBR5-AS1
Ontologies - Pathways
Huge Navigator UBR5-AS1 [HugePedia]
snp3D : Map Gene to Disease101927221
BioCentury BCIQUBR5-AS1
ClinGenUBR5-AS1
Clinical trials, drugs, therapy
Protein Interactions : CTD101927221
Clinical trialUBR5-AS1
Miscellaneous
canSAR (ICR)UBR5-AS1 (select the gene name)
HarmonizomeUBR5-AS1
DataMed IndexUBR5-AS1
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUBR5-AS1
EVEXUBR5-AS1
GoPubMedUBR5-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Jul 10 20:43:06 CEST 2020

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