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UNC5C (unc-5 netrin receptor C)

Identity

Alias_namesunc5 (C.elegans homolog) c
unc-5 homolog C (C. elegans)
Other aliasUNC5H3
HGNC (Hugo) UNC5C
LocusID (NCBI) 8633
Atlas_Id 45616
Location 4q22.3  [Link to chromosome band 4q22]
Location_base_pair Starts at 95162505 and ends at 95549210 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DUS2 (16q22.1) / UNC5C (4q22.3)UNC5C (4q22.3) / LIN7C (11p14.1)UNC5C (4q22.3) / RAP1GDS1 (4q23)
UNC5C (4q22.3) / UNC5C (4q22.3)DUS2L UNC5C 4q22.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]

Solid Tumors TT_t0416q22q22ID106269


External links

Nomenclature
HGNC (Hugo)UNC5C   12569
Cards
Entrez_Gene (NCBI)UNC5C  8633  unc-5 netrin receptor C
AliasesUNC5H3
GeneCards (Weizmann)UNC5C
Ensembl hg19 (Hinxton)ENSG00000182168 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182168 [Gene_View]  ENSG00000182168 [Sequence]  chr4:95162505-95549210 [Contig_View]  UNC5C [Vega]
ICGC DataPortalENSG00000182168
TCGA cBioPortalUNC5C
AceView (NCBI)UNC5C
Genatlas (Paris)UNC5C
WikiGenes8633
SOURCE (Princeton)UNC5C
Genetics Home Reference (NIH)UNC5C
Genomic and cartography
GoldenPath hg38 (UCSC)UNC5C  -     chr4:95162505-95549210 -  4q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UNC5C  -     4q22.3   [Description]    (hg19-Feb_2009)
GoldenPathUNC5C - 4q22.3 [CytoView hg19]  UNC5C - 4q22.3 [CytoView hg38]
ImmunoBaseENSG00000182168
Mapping of homologs : NCBIUNC5C [Mapview hg19]  UNC5C [Mapview hg38]
OMIM603610   
Gene and transcription
Genbank (Entrez)AF055634 AK022487 AK290500 AK308421 BC034747
RefSeq transcript (Entrez)NM_003728
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UNC5C
Alternative Splicing GalleryENSG00000182168
Gene ExpressionUNC5C [ NCBI-GEO ]   UNC5C [ EBI - ARRAY_EXPRESS ]   UNC5C [ SEEK ]   UNC5C [ MEM ]
Gene Expression Viewer (FireBrowse)UNC5C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)8633
GTEX Portal (Tissue expression)UNC5C
Human Protein AtlasENSG00000182168-UNC5C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)UNC5C
DMDM Disease mutations8633
Blocks (Seattle)UNC5C
Human Protein Atlas [tissue]ENSG00000182168-UNC5C [tissue]
HPRD04678
IPIIPI00293757   IPI00470749   IPI00939518   IPI00964794   IPI00965674   
Protein Interaction databases
FunCoupENSG00000182168
BioGRIDUNC5C
STRING (EMBL)UNC5C
ZODIACUNC5C
Ontologies - Pathways
Huge Navigator UNC5C [HugePedia]
snp3D : Map Gene to Disease8633
BioCentury BCIQUNC5C
ClinGenUNC5C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD8633
Chemical/Pharm GKB GenePA37206
Clinical trialUNC5C
Miscellaneous
canSAR (ICR)UNC5C (select the gene name)
DataMed IndexUNC5C
Probes
Litterature
PubMed44 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUNC5C
EVEXUNC5C
GoPubMedUNC5C
iHOPUNC5C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Feb 19 17:15:36 CET 2020

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