Atlas of Genetics and Cytogenetics in Oncology and Haematology


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UPK3BL2 (uroplakin 3B like 2)

Identity

Other alias-
HGNC (Hugo) UPK3BL2
LocusID (NCBI) 107983993
Atlas_Id 80605
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 102537919 and ends at 102544788 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)UPK3BL2   53444
Cards
Entrez_Gene (NCBI)UPK3BL2  107983993  uroplakin 3B like 2
Aliases
GeneCards (Weizmann)UPK3BL2
Ensembl hg19 (Hinxton)ENSG00000284981 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000284981 [Gene_View]  ENSG00000284981 [Sequence]  chr7:102537919-102544788 [Contig_View]  UPK3BL2 [Vega]
ICGC DataPortalENSG00000284981
TCGA cBioPortalUPK3BL2
AceView (NCBI)UPK3BL2
Genatlas (Paris)UPK3BL2
WikiGenes107983993
SOURCE (Princeton)UPK3BL2
Genetics Home Reference (NIH)UPK3BL2
Genomic and cartography
GoldenPath hg38 (UCSC)UPK3BL2  -     chr7:102537919-102544788 -  7q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UPK3BL2  -     7q22.1   [Description]    (hg19-Feb_2009)
GoldenPathUPK3BL2 - 7q22.1 [CytoView hg19]  UPK3BL2 - 7q22.1 [CytoView hg38]
ImmunoBaseENSG00000284981
Mapping of homologs : NCBIUPK3BL2 [Mapview hg19]  UPK3BL2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001363506
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UPK3BL2
Alternative Splicing GalleryENSG00000284981
Gene ExpressionUPK3BL2 [ NCBI-GEO ]   UPK3BL2 [ EBI - ARRAY_EXPRESS ]   UPK3BL2 [ SEEK ]   UPK3BL2 [ MEM ]
Gene Expression Viewer (FireBrowse)UPK3BL2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)107983993
GTEX Portal (Tissue expression)UPK3BL2
Human Protein AtlasENSG00000284981-UPK3BL2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)UPK3BL2
DMDM Disease mutations107983993
Blocks (Seattle)UPK3BL2
Human Protein Atlas [tissue]ENSG00000284981-UPK3BL2 [tissue]
Protein Interaction databases
FunCoupENSG00000284981
BioGRIDUPK3BL2
STRING (EMBL)UPK3BL2
ZODIACUPK3BL2
Ontologies - Pathways
Huge Navigator UPK3BL2 [HugePedia]
snp3D : Map Gene to Disease107983993
BioCentury BCIQUPK3BL2
ClinGenUPK3BL2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD107983993
Clinical trialUPK3BL2
Miscellaneous
canSAR (ICR)UPK3BL2 (select the gene name)
DataMed IndexUPK3BL2
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineUPK3BL2
EVEXUPK3BL2
GoPubMedUPK3BL2
iHOPUPK3BL2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 16:12:21 CEST 2019

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