Atlas of Genetics and Cytogenetics in Oncology and Haematology


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UQCC3 (ubiquinol-cytochrome c reductase complex assembly factor 3)

Identity

Alias_namesC11orf83
chromosome 11 open reading frame 83
Alias_symbol (synonym)UNQ655
Other aliasCCDS41658.1
MC3DN9
HGNC (Hugo) UQCC3
LocusID (NCBI) 790955
Atlas_Id 56488
Location 11q12.3  [Link to chromosome band 11q12]
Location_base_pair Starts at 62671654 and ends at 62673690 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
FCHSD2 (11q13.4) / UQCC3 (11q12.3)SF3B1 (2q33.1) / UQCC3 (11q12.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(11;11)(q12;q13) FCHSD2/UQCC3


External links

Nomenclature
HGNC (Hugo)UQCC3   34399
Cards
Entrez_Gene (NCBI)UQCC3  790955  ubiquinol-cytochrome c reductase complex assembly factor 3
AliasesC11orf83; CCDS41658.1; MC3DN9; UNQ655
GeneCards (Weizmann)UQCC3
Ensembl hg19 (Hinxton)ENSG00000204922 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204922 [Gene_View]  ENSG00000204922 [Sequence]  chr11:62671654-62673690 [Contig_View]  UQCC3 [Vega]
ICGC DataPortalENSG00000204922
TCGA cBioPortalUQCC3
AceView (NCBI)UQCC3
Genatlas (Paris)UQCC3
WikiGenes790955
SOURCE (Princeton)UQCC3
Genetics Home Reference (NIH)UQCC3
Genomic and cartography
GoldenPath hg38 (UCSC)UQCC3  -     chr11:62671654-62673690 +  11q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UQCC3  -     11q12.3   [Description]    (hg19-Feb_2009)
GoldenPathUQCC3 - 11q12.3 [CytoView hg19]  UQCC3 - 11q12.3 [CytoView hg38]
ImmunoBaseENSG00000204922
Mapping of homologs : NCBIUQCC3 [Mapview hg19]  UQCC3 [Mapview hg38]
OMIM616097   616111   
Gene and transcription
Genbank (Entrez)AI972746 AY358935 BC090057 BF055120 BG385605
RefSeq transcript (Entrez)NM_001085372
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UQCC3
Cluster EST : UnigeneHs.569009 [ NCBI ]
CGAP (NCI)Hs.569009
Alternative Splicing GalleryENSG00000204922
Gene ExpressionUQCC3 [ NCBI-GEO ]   UQCC3 [ EBI - ARRAY_EXPRESS ]   UQCC3 [ SEEK ]   UQCC3 [ MEM ]
Gene Expression Viewer (FireBrowse)UQCC3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)790955
GTEX Portal (Tissue expression)UQCC3
Human Protein AtlasENSG00000204922-UQCC3 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6UW78   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6UW78  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6UW78
Splice isoforms : SwissVarQ6UW78
PhosPhoSitePlusQ6UW78
Domains : Interpro (EBI)UQCC3   
Domain families : Pfam (Sanger)DUF4574 (PF15141)   
Domain families : Pfam (NCBI)pfam15141   
Conserved Domain (NCBI)UQCC3
DMDM Disease mutations790955
Blocks (Seattle)UQCC3
SuperfamilyQ6UW78
Human Protein Atlas [tissue]ENSG00000204922-UQCC3 [tissue]
Peptide AtlasQ6UW78
IPIIPI00978059   
Protein Interaction databases
DIP (DOE-UCLA)Q6UW78
IntAct (EBI)Q6UW78
FunCoupENSG00000204922
BioGRIDUQCC3
STRING (EMBL)UQCC3
ZODIACUQCC3
Ontologies - Pathways
QuickGOQ6UW78
Ontology : AmiGOmitochondrial respiratory chain complex III  mitochondrial respiratory chain complex III  mitochondrial electron transport, ubiquinol to cytochrome c  mitochondrial electron transport, ubiquinol to cytochrome c  ATP biosynthetic process  integral component of mitochondrial inner membrane  integral component of mitochondrial inner membrane  mitochondrial respiratory chain complex III assembly  mitochondrial respiratory chain complex III assembly  cristae formation  phosphatidic acid binding  cardiolipin binding  
Ontology : EGO-EBImitochondrial respiratory chain complex III  mitochondrial respiratory chain complex III  mitochondrial electron transport, ubiquinol to cytochrome c  mitochondrial electron transport, ubiquinol to cytochrome c  ATP biosynthetic process  integral component of mitochondrial inner membrane  integral component of mitochondrial inner membrane  mitochondrial respiratory chain complex III assembly  mitochondrial respiratory chain complex III assembly  cristae formation  phosphatidic acid binding  cardiolipin binding  
NDEx NetworkUQCC3
Atlas of Cancer Signalling NetworkUQCC3
Wikipedia pathwaysUQCC3
Orthology - Evolution
OrthoDB790955
GeneTree (enSembl)ENSG00000204922
Phylogenetic Trees/Animal Genes : TreeFamUQCC3
HOGENOMQ6UW78
Homologs : HomoloGeneUQCC3
Homology/Alignments : Family Browser (UCSC)UQCC3
Gene fusions - Rearrangements
Fusion : QuiverUQCC3
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUQCC3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UQCC3
dbVarUQCC3
ClinVarUQCC3
1000_GenomesUQCC3 
Exome Variant ServerUQCC3
ExAC (Exome Aggregation Consortium)ENSG00000204922
GNOMAD BrowserENSG00000204922
Varsome BrowserUQCC3
Genetic variants : HAPMAP790955
Genomic Variants (DGV)UQCC3 [DGVbeta]
DECIPHERUQCC3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUQCC3 
Mutations
ICGC Data PortalUQCC3 
TCGA Data PortalUQCC3 
Broad Tumor PortalUQCC3
OASIS PortalUQCC3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUQCC3  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DUQCC3
Mutations and Diseases : HGMDUQCC3
BioMutasearch UQCC3
DgiDB (Drug Gene Interaction Database)UQCC3
DoCM (Curated mutations)UQCC3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UQCC3 (select a term)
intoGenUQCC3
Cancer3DUQCC3(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616097    616111   
Orphanet3378   
DisGeNETUQCC3
MedgenUQCC3
Genetic Testing Registry UQCC3
NextProtQ6UW78 [Medical]
TSGene790955
GENETestsUQCC3
Target ValidationUQCC3
Huge Navigator UQCC3 [HugePedia]
snp3D : Map Gene to Disease790955
BioCentury BCIQUQCC3
ClinGenUQCC3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD790955
Chemical/Pharm GKB GenePA162377760
Clinical trialUQCC3
Miscellaneous
canSAR (ICR)UQCC3 (select the gene name)
DataMed IndexUQCC3
Probes
Litterature
PubMed13 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUQCC3
EVEXUQCC3
GoPubMedUQCC3
iHOPUQCC3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Nov 13 18:14:24 CET 2019

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