Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

UQCRB (ubiquinol-cytochrome c reductase binding protein)

Identity

Alias_namesUQBP
Alias_symbol (synonym)QP-C
QCR7
UQCR6
Other aliasMC3DN3
QPC
UQBC
UQPC
HGNC (Hugo) UQCRB
LocusID (NCBI) 7381
Atlas_Id 57528
Location 8q22.1  [Link to chromosome band 8q22]
Location_base_pair Starts at 96226676 and ends at 96235634 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)UQCRB   12582
Cards
Entrez_Gene (NCBI)UQCRB  7381  ubiquinol-cytochrome c reductase binding protein
AliasesMC3DN3; QCR7; QP-C; QPC; 
UQBC; UQBP; UQCR6; UQPC
GeneCards (Weizmann)UQCRB
Ensembl hg19 (Hinxton)ENSG00000156467 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000156467 [Gene_View]  ENSG00000156467 [Sequence]  chr8:96226676-96235634 [Contig_View]  UQCRB [Vega]
ICGC DataPortalENSG00000156467
TCGA cBioPortalUQCRB
AceView (NCBI)UQCRB
Genatlas (Paris)UQCRB
WikiGenes7381
SOURCE (Princeton)UQCRB
Genetics Home Reference (NIH)UQCRB
Genomic and cartography
GoldenPath hg38 (UCSC)UQCRB  -     chr8:96226676-96235634 -  8q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UQCRB  -     8q22.1   [Description]    (hg19-Feb_2009)
GoldenPathUQCRB - 8q22.1 [CytoView hg19]  UQCRB - 8q22.1 [CytoView hg38]
ImmunoBaseENSG00000156467
Mapping of homologs : NCBIUQCRB [Mapview hg19]  UQCRB [Mapview hg38]
OMIM191330   615158   
Gene and transcription
Genbank (Entrez)AI365233 AK295007 AK307085 AK311756 AV747179
RefSeq transcript (Entrez)NM_001199975 NM_001254752 NM_006294
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UQCRB
Cluster EST : UnigeneHs.131255 [ NCBI ]
CGAP (NCI)Hs.131255
Alternative Splicing GalleryENSG00000156467
Gene ExpressionUQCRB [ NCBI-GEO ]   UQCRB [ EBI - ARRAY_EXPRESS ]   UQCRB [ SEEK ]   UQCRB [ MEM ]
Gene Expression Viewer (FireBrowse)UQCRB [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7381
GTEX Portal (Tissue expression)UQCRB
Human Protein AtlasENSG00000156467-UQCRB [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP14927   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP14927  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP14927
Splice isoforms : SwissVarP14927
PhosPhoSitePlusP14927
Domains : Interpro (EBI)QCR7    QCR7_sf   
Domain families : Pfam (Sanger)UCR_14kD (PF02271)   
Domain families : Pfam (NCBI)pfam02271   
Domain structure : Prodom (Prabi Lyon)Cyt_bd_ubiquinol_oxidase_14kDa (PD008153)   
Conserved Domain (NCBI)UQCRB
DMDM Disease mutations7381
Blocks (Seattle)UQCRB
PDB (RSDB)5XTE    5XTH    5XTI   
PDB Europe5XTE    5XTH    5XTI   
PDB (PDBSum)5XTE    5XTH    5XTI   
PDB (IMB)5XTE    5XTH    5XTI   
Structural Biology KnowledgeBase5XTE    5XTH    5XTI   
SCOP (Structural Classification of Proteins)5XTE    5XTH    5XTI   
CATH (Classification of proteins structures)5XTE    5XTH    5XTI   
SuperfamilyP14927
Human Protein Atlas [tissue]ENSG00000156467-UQCRB [tissue]
Peptide AtlasP14927
IPIIPI00220416   IPI00976562   IPI01012160   IPI00974054   IPI00790644   IPI00974316   
Protein Interaction databases
DIP (DOE-UCLA)P14927
IntAct (EBI)P14927
FunCoupENSG00000156467
BioGRIDUQCRB
STRING (EMBL)UQCRB
ZODIACUQCRB
Ontologies - Pathways
QuickGOP14927
Ontology : AmiGOprotein binding  mitochondrial inner membrane  mitochondrial respiratory chain  mitochondrial respiratory chain complex III  oxidative phosphorylation  mitochondrial electron transport, ubiquinol to cytochrome c  mitochondrial electron transport, ubiquinol to cytochrome c  ubiquinol-cytochrome-c reductase activity  aerobic respiration  mitochondrial respiratory chain complex III assembly  oxidation-reduction process  
Ontology : EGO-EBIprotein binding  mitochondrial inner membrane  mitochondrial respiratory chain  mitochondrial respiratory chain complex III  oxidative phosphorylation  mitochondrial electron transport, ubiquinol to cytochrome c  mitochondrial electron transport, ubiquinol to cytochrome c  ubiquinol-cytochrome-c reductase activity  aerobic respiration  mitochondrial respiratory chain complex III assembly  oxidation-reduction process  
Pathways : KEGGOxidative phosphorylation    Cardiac muscle contraction    Non-alcoholic fatty liver disease (NAFLD)    Alzheimer's disease    Parkinson's disease    Huntington's disease   
NDEx NetworkUQCRB
Atlas of Cancer Signalling NetworkUQCRB
Wikipedia pathwaysUQCRB
Orthology - Evolution
OrthoDB7381
GeneTree (enSembl)ENSG00000156467
Phylogenetic Trees/Animal Genes : TreeFamUQCRB
HOGENOMP14927
Homologs : HomoloGeneUQCRB
Homology/Alignments : Family Browser (UCSC)UQCRB
Gene fusions - Rearrangements
Fusion : QuiverUQCRB
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerUQCRB [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)UQCRB
dbVarUQCRB
ClinVarUQCRB
1000_GenomesUQCRB 
Exome Variant ServerUQCRB
ExAC (Exome Aggregation Consortium)ENSG00000156467
GNOMAD BrowserENSG00000156467
Varsome BrowserUQCRB
Genetic variants : HAPMAP7381
Genomic Variants (DGV)UQCRB [DGVbeta]
DECIPHERUQCRB [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisUQCRB 
Mutations
ICGC Data PortalUQCRB 
TCGA Data PortalUQCRB 
Broad Tumor PortalUQCRB
OASIS PortalUQCRB [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICUQCRB  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DUQCRB
Mutations and Diseases : HGMDUQCRB
BioMutasearch UQCRB
DgiDB (Drug Gene Interaction Database)UQCRB
DoCM (Curated mutations)UQCRB (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)UQCRB (select a term)
intoGenUQCRB
Cancer3DUQCRB(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM191330    615158   
Orphanet
DisGeNETUQCRB
MedgenUQCRB
Genetic Testing Registry UQCRB
NextProtP14927 [Medical]
TSGene7381
GENETestsUQCRB
Target ValidationUQCRB
Huge Navigator UQCRB [HugePedia]
snp3D : Map Gene to Disease7381
BioCentury BCIQUQCRB
ClinGenUQCRB
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7381
Chemical/Pharm GKB GenePA37213
Clinical trialUQCRB
Miscellaneous
canSAR (ICR)UQCRB (select the gene name)
DataMed IndexUQCRB
Probes
Litterature
PubMed38 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUQCRB
EVEXUQCRB
GoPubMedUQCRB
iHOPUQCRB
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Nov 13 18:14:25 CET 2019
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.