Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

USP27X-AS1 (USP27X antisense RNA 1 (head to head))

Identity

Alias (NCBI)-
HGNC (Hugo) USP27X-AS1
LocusID (NCBI) 158572
Atlas_Id 75552
Location Xp11.23  [Link to chromosome band Xp11]
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)USP27X-AS1   27249
Cards
Entrez_Gene (NCBI)USP27X-AS1  158572  USP27X antisense RNA 1 (head to head)
Aliases
GeneCards (Weizmann)USP27X-AS1
Ensembl hg19 (Hinxton)ENSG00000234390 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234390 [Gene_View]  ENSG00000234390 [Sequence]  - [Contig_View]  USP27X-AS1 [Vega]
ICGC DataPortalENSG00000234390
TCGA cBioPortalUSP27X-AS1
AceView (NCBI)USP27X-AS1
Genatlas (Paris)USP27X-AS1
WikiGenes158572
SOURCE (Princeton)USP27X-AS1
Genetics Home Reference (NIH)USP27X-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)USP27X-AS1  -  
GoldenPath hg19 (UCSC)USP27X-AS1  -  
GoldenPathUSP27X-AS1 - [CytoView hg19]  USP27X-AS1 - [CytoView hg38]
ImmunoBaseENSG00000234390
genome Data Viewer NCBIUSP27X-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK056746 BC093943 BC093945 BI086725 BX106362
RefSeq transcript (Entrez)NM_001025449
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)USP27X-AS1
Alternative Splicing GalleryENSG00000234390
Gene ExpressionUSP27X-AS1 [ NCBI-GEO ]   USP27X-AS1 [ EBI - ARRAY_EXPRESS ]   USP27X-AS1 [ SEEK ]   USP27X-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)USP27X-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of USP27X-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)158572
GTEX Portal (Tissue expression)USP27X-AS1
Human Protein AtlasENSG00000234390-USP27X-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)USP27X-AS1
DMDM Disease mutations158572
Blocks (Seattle)USP27X-AS1
Human Protein Atlas [tissue]ENSG00000234390-USP27X-AS1 [tissue]
HPRD18740
IPIIPI00402739   
Protein Interaction databases
FunCoupENSG00000234390
BioGRIDUSP27X-AS1
STRING (EMBL)USP27X-AS1
ZODIACUSP27X-AS1
Ontologies - Pathways
Huge Navigator USP27X-AS1 [HugePedia]
snp3D : Map Gene to Disease158572
BioCentury BCIQUSP27X-AS1
ClinGenUSP27X-AS1
Clinical trials, drugs, therapy
Protein Interactions : CTD158572
Clinical trialUSP27X-AS1
Miscellaneous
canSAR (ICR)USP27X-AS1 (select the gene name)
HarmonizomeUSP27X-AS1
DataMed IndexUSP27X-AS1
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUSP27X-AS1
EVEXUSP27X-AS1
GoPubMedUSP27X-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jul 16 16:35:00 CEST 2020
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.