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UTRN (utrophin)

Identity

Alias_namesDMDL
utrophin (homologous to dystrophin)
Alias_symbol (synonym)DRP
DRP1
Other alias
HGNC (Hugo) UTRN
LocusID (NCBI) 7402
Atlas_Id 43837
Location 6q24.2  [Link to chromosome band 6q24]
Location_base_pair Starts at 144291737 and ends at 144853034 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
NOL10 (2p25.1) / UTRN (6q24.2)SH3PXD2A (10q24.33) / UTRN (6q24.2)UTRN (6q24.2) / CKAP4 (12q23.3)
UTRN (6q24.2) / LOC284998 ()UTRN (6q24.2) / NFIA (1p31.3)UTRN (6q24.2) / OS9 (12q13.3)
UTRN (6q24.2) / RSPH9 (6p21.1)UTRN (6q24.2) / SHPRH (6q24.3)UTRN (6q24.2) / TMEM232 (5q22.1)
UTRN (6q24.2) / UTRN (6q24.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Leukemias implicated (Data extracted from papers in the Atlas)

Leukemias TL_t0206p12q24ID3318 TL_t0614q24q24ID3317


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 2 ]

Solid Tumors TT_t0606q24q24ID107284 TT_t0612q24q13-14ID6789


External links

Nomenclature
HGNC (Hugo)UTRN   12635
Cards
Entrez_Gene (NCBI)UTRN  7402  utrophin
AliasesDMDL; DRP; DRP1
GeneCards (Weizmann)UTRN
Ensembl hg19 (Hinxton)ENSG00000152818 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000152818 [Gene_View]  ENSG00000152818 [Sequence]  chr6:144291737-144853034 [Contig_View]  UTRN [Vega]
ICGC DataPortalENSG00000152818
TCGA cBioPortalUTRN
AceView (NCBI)UTRN
Genatlas (Paris)UTRN
WikiGenes7402
SOURCE (Princeton)UTRN
Genetics Home Reference (NIH)UTRN
Genomic and cartography
GoldenPath hg38 (UCSC)UTRN  -     chr6:144291737-144853034 +  6q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)UTRN  -     6q24.2   [Description]    (hg19-Feb_2009)
GoldenPathUTRN - 6q24.2 [CytoView hg19]  UTRN - 6q24.2 [CytoView hg38]
ImmunoBaseENSG00000152818
Mapping of homologs : NCBIUTRN [Mapview hg19]  UTRN [Mapview hg38]
OMIM128240   
Gene and transcription
Genbank (Entrez)AK023675 AK292506 BE817979 BM729107 BX100445
RefSeq transcript (Entrez)NM_001375323 NM_007124
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)UTRN
Alternative Splicing GalleryENSG00000152818
Gene ExpressionUTRN [ NCBI-GEO ]   UTRN [ EBI - ARRAY_EXPRESS ]   UTRN [ SEEK ]   UTRN [ MEM ]
Gene Expression Viewer (FireBrowse)UTRN [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)7402
GTEX Portal (Tissue expression)UTRN
Human Protein AtlasENSG00000152818-UTRN [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)UTRN
DMDM Disease mutations7402
Blocks (Seattle)UTRN
Human Protein Atlas [tissue]ENSG00000152818-UTRN [tissue]
HPRD00547
IPIIPI00009329   IPI00939218   IPI00514575   IPI00646472   IPI00645974   IPI00641422   IPI00645298   IPI00644833   IPI00644301   
Protein Interaction databases
FunCoupENSG00000152818
BioGRIDUTRN
STRING (EMBL)UTRN
ZODIACUTRN
Ontologies - Pathways
Huge Navigator UTRN [HugePedia]
snp3D : Map Gene to Disease7402
BioCentury BCIQUTRN
ClinGenUTRN
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7402
Chemical/Pharm GKB GenePA37260
Clinical trialUTRN
Miscellaneous
canSAR (ICR)UTRN (select the gene name)
DataMed IndexUTRN
Probes
Litterature
PubMed123 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineUTRN
EVEXUTRN
GoPubMedUTRN
iHOPUTRN
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Feb 19 17:16:02 CET 2020

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