VPS26B (VPS26, retromer complex component B)

2014-11-01  

Identity

HGNC
VPS26B
LOCATION
11q25
LOCUSID
112936
ALIAS
Pep8b
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 112936
MIM: 610027
HGNC: 28119
Ensembl: ENSG00000151502

Variants:

dbSNP: 112936
ClinVar: 112936
TCGA: ENSG00000151502
COSMIC: VPS26B

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000151502ENST00000281187Q4G0F5
ENSG00000151502ENST00000281187A0A024R3L9
ENSG00000151502ENST00000525095Q4G0F5
ENSG00000151502ENST00000525095A0A024R3L9
ENSG00000151502ENST00000527586H0YCI7
ENSG00000151502ENST00000530402A0A0D9SFQ6

Expression (GTEx)

0
10
20
30
40
50
60
70
80
90
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
EndocytosisKEGGko04144
EndocytosisKEGGhsa04144

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
219200052011Vps26A and Vps26B subunits define distinct retromer complexes.25
261131362015Vps26B-retromer negatively regulates plasma membrane resensitization of PAR-2.2

Citation

Dessen P

VPS26B (VPS26, retromer complex component B)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75631/vps26b