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VSIG8 (V-set and immunoglobulin domain containing 8)

Identity

Other alias-
HGNC (Hugo) VSIG8
LocusID (NCBI) 391123
Atlas_Id 75647
Location 1q23.2  [Link to chromosome band 1q23]
Location_base_pair Starts at 159854316 and ends at 159862657 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)VSIG8   32063
Cards
Entrez_Gene (NCBI)VSIG8  391123  V-set and immunoglobulin domain containing 8
Aliases
GeneCards (Weizmann)VSIG8
Ensembl hg19 (Hinxton)ENSG00000243284 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000243284 [Gene_View]  ENSG00000243284 [Sequence]  chr1:159854316-159862657 [Contig_View]  VSIG8 [Vega]
ICGC DataPortalENSG00000243284
TCGA cBioPortalVSIG8
AceView (NCBI)VSIG8
Genatlas (Paris)VSIG8
WikiGenes391123
SOURCE (Princeton)VSIG8
Genetics Home Reference (NIH)VSIG8
Genomic and cartography
GoldenPath hg38 (UCSC)VSIG8  -     chr1:159854316-159862657 -  1q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)VSIG8  -     1q23.2   [Description]    (hg19-Feb_2009)
GoldenPathVSIG8 - 1q23.2 [CytoView hg19]  VSIG8 - 1q23.2 [CytoView hg38]
ImmunoBaseENSG00000243284
Mapping of homologs : NCBIVSIG8 [Mapview hg19]  VSIG8 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC132893 BC132895
RefSeq transcript (Entrez)NM_001013661
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)VSIG8
Alternative Splicing GalleryENSG00000243284
Gene ExpressionVSIG8 [ NCBI-GEO ]   VSIG8 [ EBI - ARRAY_EXPRESS ]   VSIG8 [ SEEK ]   VSIG8 [ MEM ]
Gene Expression Viewer (FireBrowse)VSIG8 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)391123
GTEX Portal (Tissue expression)VSIG8
Human Protein AtlasENSG00000243284-VSIG8 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)VSIG8
DMDM Disease mutations391123
Blocks (Seattle)VSIG8
Human Protein Atlas [tissue]ENSG00000243284-VSIG8 [tissue]
HPRD18404
Protein Interaction databases
FunCoupENSG00000243284
BioGRIDVSIG8
STRING (EMBL)VSIG8
ZODIACVSIG8
Ontologies - Pathways
Huge Navigator VSIG8 [HugePedia]
snp3D : Map Gene to Disease391123
BioCentury BCIQVSIG8
ClinGenVSIG8
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD391123
Chemical/Pharm GKB GenePA142670610
Clinical trialVSIG8
Miscellaneous
canSAR (ICR)VSIG8 (select the gene name)
HarmonizomeVSIG8
DataMed IndexVSIG8
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineVSIG8
EVEXVSIG8
GoPubMedVSIG8
iHOPVSIG8
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Mar 11 20:37:04 CET 2020

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