WDR90 (WD repeat domain 90)

2014-11-01  

Identity

HGNC
WDR90
LOCATION
16p13.3
LOCUSID
197335
ALIAS
C16orf15,C16orf16,C16orf17,C16orf18,C16orf19,POC16
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 197335
MIM: 618290
HGNC: 26960
Ensembl: ENSG00000161996

Variants:

dbSNP: 197335
ClinVar: 197335
TCGA: ENSG00000161996
COSMIC: WDR90

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000161996ENST00000293879Q96KV7
ENSG00000161996ENST00000315764Q96KV7
ENSG00000161996ENST00000546896H0YHV6
ENSG00000161996ENST00000547944G3V201
ENSG00000161996ENST00000549091F8VUX9
ENSG00000161996ENST00000550739H0YHN4
ENSG00000161996ENST00000551100H0YIW5
ENSG00000161996ENST00000552728H0YI59

Expression (GTEx)

0
10
20
30
40
50
60
70
80
90
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
287810532017Identification of Chlamydomonas Central Core Centriolar Proteins Reveals a Role for Human WDR90 in Ciliogenesis.9
312766982019WDR90 is a new component of the NLRC4 inflammasome involved in Salmonella Typhimurium resistance.1

Citation

Dessen P

WDR90 (WD repeat domain 90)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75740/wdr90