Atlas of Genetics and Cytogenetics in Oncology and Haematology


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XAGE5 (X antigen family member 5)

Identity

Alias_namesGAGED5
G antigen, family D, 5
X antigen family, member 5
Alias_symbol (synonym)XAGE-5
CT12.5
Other alias
HGNC (Hugo) XAGE5
LocusID (NCBI) 170627
Atlas_Id 43020
Location Xp11.22  [Link to chromosome band Xp11]
Location_base_pair Starts at 52812204 and ends at 52818298 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)XAGE5   30930
Cards
Entrez_Gene (NCBI)XAGE5  170627  X antigen family member 5
AliasesCT12.5; GAGED5; XAGE-5
GeneCards (Weizmann)XAGE5
Ensembl hg19 (Hinxton)ENSG00000171405 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000171405 [Gene_View]  ENSG00000171405 [Sequence]  chrX:52812204-52818298 [Contig_View]  XAGE5 [Vega]
ICGC DataPortalENSG00000171405
TCGA cBioPortalXAGE5
AceView (NCBI)XAGE5
Genatlas (Paris)XAGE5
WikiGenes170627
SOURCE (Princeton)XAGE5
Genetics Home Reference (NIH)XAGE5
Genomic and cartography
GoldenPath hg38 (UCSC)XAGE5  -     chrX:52812204-52818298 +  Xp11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)XAGE5  -     Xp11.22   [Description]    (hg19-Feb_2009)
GoldenPathXAGE5 - Xp11.22 [CytoView hg19]  XAGE5 - Xp11.22 [CytoView hg38]
ImmunoBaseENSG00000171405
Mapping of homologs : NCBIXAGE5 [Mapview hg19]  XAGE5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC069129 BC103962 BC103963 BC103964
RefSeq transcript (Entrez)NM_130775
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)XAGE5
Alternative Splicing GalleryENSG00000171405
Gene ExpressionXAGE5 [ NCBI-GEO ]   XAGE5 [ EBI - ARRAY_EXPRESS ]   XAGE5 [ SEEK ]   XAGE5 [ MEM ]
Gene Expression Viewer (FireBrowse)XAGE5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)170627
GTEX Portal (Tissue expression)XAGE5
Human Protein AtlasENSG00000171405-XAGE5 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)XAGE5
DMDM Disease mutations170627
Blocks (Seattle)XAGE5
Human Protein Atlas [tissue]ENSG00000171405-XAGE5 [tissue]
HPRD06754
IPIIPI00103369   IPI00651675   
Protein Interaction databases
FunCoupENSG00000171405
BioGRIDXAGE5
STRING (EMBL)XAGE5
ZODIACXAGE5
Ontologies - Pathways
Huge Navigator XAGE5 [HugePedia]
snp3D : Map Gene to Disease170627
BioCentury BCIQXAGE5
ClinGenXAGE5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD170627
Chemical/Pharm GKB GenePA134961730
Clinical trialXAGE5
Miscellaneous
canSAR (ICR)XAGE5 (select the gene name)
DataMed IndexXAGE5
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineXAGE5
EVEXXAGE5
GoPubMedXAGE5
iHOPXAGE5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Feb 19 17:16:47 CET 2020

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