Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

XDH (xanthine dehydrogenase)

Identity

Alias_namesxanthene dehydrogenase
Alias_symbol (synonym)XOR
XO
Other aliasXAN1
HGNC (Hugo) XDH
LocusID (NCBI) 7498
Atlas_Id 50157
Location 2p23.1  [Link to chromosome band 2p23]
Location_base_pair Starts at 31334322 and ends at 31414745 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
XDH (2p23.1) / LOC146880 (17q24.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)XDH   12805
Cards
Entrez_Gene (NCBI)XDH  7498  xanthine dehydrogenase
AliasesXAN1; XO; XOR
GeneCards (Weizmann)XDH
Ensembl hg19 (Hinxton)ENSG00000158125 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000158125 [Gene_View]  ENSG00000158125 [Sequence]  chr2:31334322-31414745 [Contig_View]  XDH [Vega]
ICGC DataPortalENSG00000158125
TCGA cBioPortalXDH
AceView (NCBI)XDH
Genatlas (Paris)XDH
WikiGenes7498
SOURCE (Princeton)XDH
Genetics Home Reference (NIH)XDH
Genomic and cartography
GoldenPath hg38 (UCSC)XDH  -     chr2:31334322-31414745 -  2p23.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)XDH  -     2p23.1   [Description]    (hg19-Feb_2009)
GoldenPathXDH - 2p23.1 [CytoView hg19]  XDH - 2p23.1 [CytoView hg38]
ImmunoBaseENSG00000158125
Mapping of homologs : NCBIXDH [Mapview hg19]  XDH [Mapview hg38]
OMIM278300   607633   
Gene and transcription
Genbank (Entrez)AK130114 CV574002 D11456 U06117 U39487
RefSeq transcript (Entrez)NM_000379
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)XDH
Alternative Splicing GalleryENSG00000158125
Gene ExpressionXDH [ NCBI-GEO ]   XDH [ EBI - ARRAY_EXPRESS ]   XDH [ SEEK ]   XDH [ MEM ]
Gene Expression Viewer (FireBrowse)XDH [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)7498
GTEX Portal (Tissue expression)XDH
Human Protein AtlasENSG00000158125-XDH [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)XDH
DMDM Disease mutations7498
Blocks (Seattle)XDH
Human Protein Atlas [tissue]ENSG00000158125-XDH [tissue]
HPRD06363
IPIIPI00244391   IPI00921526   
Protein Interaction databases
FunCoupENSG00000158125
BioGRIDXDH
STRING (EMBL)XDH
ZODIACXDH
Ontologies - Pathways
Huge Navigator XDH [HugePedia]
snp3D : Map Gene to Disease7498
BioCentury BCIQXDH
ClinGenXDH
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD7498
Chemical/Pharm GKB GenePA37404
Clinical trialXDH
Miscellaneous
canSAR (ICR)XDH (select the gene name)
DataMed IndexXDH
Probes
Litterature
PubMed132 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineXDH
EVEXXDH
GoPubMedXDH
iHOPXDH
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Feb 19 17:16:49 CET 2020

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.