XKR4 (XK related 4)

2014-11-01 Affiliation

Identity

HGNC

XKR4

LOCATION

8q12.1

LOCUSID

114786

ALIAS

XRG4

FUSION GENES

Show Gene Fusions

Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, contribute in submission tool

Other Information

Locus ID:

NCBI: 114786
HGNC: 29394
Ensembl: ENSG00000206579

Variants:

dbSNP: 114786
ClinVar: 114786
TCGA: ENSG00000206579
COSMIC: XKR4

RNA/Proteins

Gene ID	Transcript ID	Uniprot
ENSG00000206579	ENST00000327381	Q5GH76
ENSG00000206579	ENST00000622811	Q5GH76

Expression (GTEx)

Adipose - Subcutaneous

Adipose - Visceral

Adrenal Gland

Artery - Aorta

Artery - Tibial

Bladder

Brain - Amygdala

Brain - Anterior cingulate cortex

Brain - Caudate

Brain - Cerebellar Hemisphere

Brain - Cerebellum

Brain - Cortex

Brain - Frontal Cortex

Brain - Hippocampus

Brain - Hypothalamus

Brain - Nucleus accumbens

Brain - Putamen

Brain - Spinal cord

Brain - Substantia nigra

Breast - Mammary Tissue

Cells - Cultured fibroblasts

Cells - EBV - transformed lymphocytes

Cervix - Ectocervix

Cervix - Endocervix

Colon - Sigmoid

Colon - Transverse

Esophagus - Gastroesophageal Junction

Esophagus - Mucosa

Esophagus - Muscularis

Fallopian Tube

Heart - Atrial Appendage

Heart - Left Ventricle

Kidney - Cortex

Kidney - Medulla

Liver

Lung

Minor Salivary Gland

Muscle - Skeletal

Nerve - Tibial

Ovary

Pancreas

Pituitary

Prostate

Skin - Not Sun Exposed

Skin - Sun Exposed

Small Intestine - Terminal Ileum

Spleen

Stomach

Testis

Thyroid

Uterus

Vagina

Whole Blood

Protein levels (Protein atlas)

Not detected

Low

Medium

High

References

Pubmed ID	Year	Title	Citations
20379614	2010	Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.	62
18521090	2009	Association of the NPAS3 gene and five other loci with response to the antipsychotic iloperidone identified in a whole genome association study.	44
19573479	2009	Applicability of a genetic signature for enhanced iloperidone efficacy in the treatment of schizophrenia.	12
20607790	2010	Analysis of GWAS top hits in ADHD suggests association to two polymorphisms located in genes expressed in the cerebellum.	12
24852370	2014	Genome-wide association study identifies a novel susceptibility gene for serum TSH levels in Chinese populations.	9

Citation

Dessen P

XKR4 (XK related 4)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75782/xkr4