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YAE1 (YAE1 maturation factor of ABCE1)

Identity

Other aliasC7orf36
CIAB2
GK003
YAE1D1
HGNC (Hugo) YAE1
LocusID (NCBI) 57002
Atlas_Id 80403
Location 7p14.1  [Link to chromosome band 7p14]
Location_base_pair Starts at 39566376 and ends at 39572881 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)YAE1   24857
Cards
Entrez_Gene (NCBI)YAE1  57002  YAE1 maturation factor of ABCE1
AliasesC7orf36; CIAB2; GK003; YAE1D1
GeneCards (Weizmann)YAE1
Ensembl hg19 (Hinxton)ENSG00000241127 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000241127 [Gene_View]  ENSG00000241127 [Sequence]  chr7:39566376-39572881 [Contig_View]  YAE1 [Vega]
ICGC DataPortalENSG00000241127
TCGA cBioPortalYAE1
AceView (NCBI)YAE1
Genatlas (Paris)YAE1
WikiGenes57002
SOURCE (Princeton)YAE1
Genetics Home Reference (NIH)YAE1
Genomic and cartography
GoldenPath hg38 (UCSC)YAE1  -     chr7:39566376-39572881 +  7p14.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)YAE1  -     7p14.1   [Description]    (hg19-Feb_2009)
GoldenPathYAE1 - 7p14.1 [CytoView hg19]  YAE1 - 7p14.1 [CytoView hg38]
ImmunoBaseENSG00000241127
Mapping of homologs : NCBIYAE1 [Mapview hg19]  YAE1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA157293 AF226046 AK096857 AK293511 AK314937
RefSeq transcript (Entrez)NM_001282446 NM_020192
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)YAE1
Cluster EST : UnigeneHs.83313 [ NCBI ]
CGAP (NCI)Hs.83313
Alternative Splicing GalleryENSG00000241127
Gene ExpressionYAE1 [ NCBI-GEO ]   YAE1 [ EBI - ARRAY_EXPRESS ]   YAE1 [ SEEK ]   YAE1 [ MEM ]
Gene Expression Viewer (FireBrowse)YAE1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57002
GTEX Portal (Tissue expression)YAE1
Human Protein AtlasENSG00000241127-YAE1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9NRH1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9NRH1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9NRH1
Splice isoforms : SwissVarQ9NRH1
PhosPhoSitePlusQ9NRH1
Domains : Interpro (EBI)Essential_protein_Yae1_N   
Domain families : Pfam (Sanger)Yae1_N (PF09811)   
Domain families : Pfam (NCBI)pfam09811   
Conserved Domain (NCBI)YAE1
DMDM Disease mutations57002
Blocks (Seattle)YAE1
SuperfamilyQ9NRH1
Human Protein Atlas [tissue]ENSG00000241127-YAE1 [tissue]
Peptide AtlasQ9NRH1
IPIIPI00549169   IPI00909821   IPI00941621   
Protein Interaction databases
DIP (DOE-UCLA)Q9NRH1
IntAct (EBI)Q9NRH1
FunCoupENSG00000241127
BioGRIDYAE1
STRING (EMBL)YAE1
ZODIACYAE1
Ontologies - Pathways
QuickGOQ9NRH1
Ontology : AmiGOnucleus  cytoplasm  protein maturation by [4Fe-4S] cluster transfer  
Ontology : EGO-EBInucleus  cytoplasm  protein maturation by [4Fe-4S] cluster transfer  
NDEx NetworkYAE1
Atlas of Cancer Signalling NetworkYAE1
Wikipedia pathwaysYAE1
Orthology - Evolution
OrthoDB57002
GeneTree (enSembl)ENSG00000241127
Phylogenetic Trees/Animal Genes : TreeFamYAE1
HOGENOMQ9NRH1
Homologs : HomoloGeneYAE1
Homology/Alignments : Family Browser (UCSC)YAE1
Gene fusions - Rearrangements
Fusion : QuiverYAE1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerYAE1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)YAE1
dbVarYAE1
ClinVarYAE1
1000_GenomesYAE1 
Exome Variant ServerYAE1
ExAC (Exome Aggregation Consortium)ENSG00000241127
GNOMAD BrowserENSG00000241127
Varsome BrowserYAE1
Genetic variants : HAPMAP57002
Genomic Variants (DGV)YAE1 [DGVbeta]
DECIPHERYAE1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisYAE1 
Mutations
ICGC Data PortalYAE1 
TCGA Data PortalYAE1 
Broad Tumor PortalYAE1
OASIS PortalYAE1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDYAE1
BioMutasearch YAE1
DgiDB (Drug Gene Interaction Database)YAE1
DoCM (Curated mutations)YAE1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)YAE1 (select a term)
intoGenYAE1
Cancer3DYAE1(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETYAE1
MedgenYAE1
Genetic Testing Registry YAE1
NextProtQ9NRH1 [Medical]
TSGene57002
GENETestsYAE1
Target ValidationYAE1
Huge Navigator YAE1 [HugePedia]
snp3D : Map Gene to Disease57002
BioCentury BCIQYAE1
ClinGenYAE1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD57002
Chemical/Pharm GKB GenePA134961882
Clinical trialYAE1
Miscellaneous
canSAR (ICR)YAE1 (select the gene name)
DataMed IndexYAE1
Probes
Litterature
PubMed19 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineYAE1
EVEXYAE1
GoPubMedYAE1
iHOPYAE1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 16:13:08 CEST 2019

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