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ZBTB20-AS5 (ZBTB20 antisense RNA 5)

Identity

Other alias-
HGNC (Hugo) ZBTB20-AS5
LocusID (NCBI) 101929754
Atlas_Id 79638
Location 3q13.31  [Link to chromosome band 3q13]
Location_base_pair Starts at 114453593 and ends at 114520132 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZBTB20-AS5   52841
Cards
Entrez_Gene (NCBI)ZBTB20-AS5  101929754  ZBTB20 antisense RNA 5
Aliases
GeneCards (Weizmann)ZBTB20-AS5
Ensembl hg19 (Hinxton)ENSG00000242290 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000242290 [Gene_View]  ENSG00000242290 [Sequence]  chr3:114453593-114520132 [Contig_View]  ZBTB20-AS5 [Vega]
ICGC DataPortalENSG00000242290
TCGA cBioPortalZBTB20-AS5
AceView (NCBI)ZBTB20-AS5
Genatlas (Paris)ZBTB20-AS5
WikiGenes101929754
SOURCE (Princeton)ZBTB20-AS5
Genetics Home Reference (NIH)ZBTB20-AS5
Genomic and cartography
GoldenPath hg38 (UCSC)ZBTB20-AS5  -     chr3:114453593-114520132 +  3q13.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZBTB20-AS5  -     3q13.31   [Description]    (hg19-Feb_2009)
GoldenPathZBTB20-AS5 - 3q13.31 [CytoView hg19]  ZBTB20-AS5 - 3q13.31 [CytoView hg38]
ImmunoBaseENSG00000242290
Mapping of homologs : NCBIZBTB20-AS5 [Mapview hg19]  ZBTB20-AS5 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BF513097
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZBTB20-AS5
Cluster EST : UnigeneHs.614195 [ NCBI ]
CGAP (NCI)Hs.614195
Alternative Splicing GalleryENSG00000242290
Gene ExpressionZBTB20-AS5 [ NCBI-GEO ]   ZBTB20-AS5 [ EBI - ARRAY_EXPRESS ]   ZBTB20-AS5 [ SEEK ]   ZBTB20-AS5 [ MEM ]
Gene Expression Viewer (FireBrowse)ZBTB20-AS5 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101929754
GTEX Portal (Tissue expression)ZBTB20-AS5
Human Protein AtlasENSG00000242290-ZBTB20-AS5 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZBTB20-AS5
DMDM Disease mutations101929754
Blocks (Seattle)ZBTB20-AS5
Human Protein Atlas [tissue]ENSG00000242290-ZBTB20-AS5 [tissue]
Protein Interaction databases
FunCoupENSG00000242290
BioGRIDZBTB20-AS5
STRING (EMBL)ZBTB20-AS5
ZODIACZBTB20-AS5
Ontologies - Pathways
Huge Navigator ZBTB20-AS5 [HugePedia]
snp3D : Map Gene to Disease101929754
BioCentury BCIQZBTB20-AS5
ClinGenZBTB20-AS5
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101929754
Clinical trialZBTB20-AS5
Miscellaneous
canSAR (ICR)ZBTB20-AS5 (select the gene name)
DataMed IndexZBTB20-AS5
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineZBTB20-AS5
EVEXZBTB20-AS5
GoPubMedZBTB20-AS5
iHOPZBTB20-AS5
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 16:13:17 CEST 2019

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