ZBTB20 (zinc finger and BTB domain containing 20)

2003-02-01  

Identity

HGNC
ZBTB20
LOCATION
3q13.31
LOCUSID
26137
ALIAS
DPZF,HOF,ODA-8S,PRIMS,ZNF288
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 26137
MIM: 606025
HGNC: 13503
Ensembl: ENSG00000181722

Variants:

dbSNP: 26137
ClinVar: 26137
TCGA: ENSG00000181722
COSMIC: ZBTB20

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000181722ENST00000357258Q9HC78
ENSG00000181722ENST00000393785Q9HC78
ENSG00000181722ENST00000462705Q9HC78
ENSG00000181722ENST00000464560Q9HC78
ENSG00000181722ENST00000470311C9JCX0
ENSG00000181722ENST00000471418Q9HC78
ENSG00000181722ENST00000474710Q9HC78
ENSG00000181722ENST00000481632Q9HC78
ENSG00000181722ENST00000482689C9JUH0

Expression (GTEx)

0
1
2
3
4
5
6
7
8
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
220375512011A genome-wide association study identifies new susceptibility loci for non-cardia gastric cancer at 3q13.31 and 5p13.1.106
199131212009Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip.85
192400612009Coeliac disease-associated risk variants in TNFAIP3 and REL implicate altered NF-kappaB signalling.75
203796142010Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score.62
246940132014Hypermethylation in the ZBTB20 gene is associated with major depressive disorder.33
198502832010Identification of novel candidate genes for treatment response to risperidone and susceptibility for schizophrenia: integrated analysis among pharmacogenomics, mouse expression, and genetic case-control association approaches.27
250171022014Mutations in ZBTB20 cause Primrose syndrome.27
199554702010Zbtb20-induced CA1 pyramidal neuron development and area enlargement in the cerebral midline cortex of mice.23
217029922011Zinc finger protein ZBTB20 expression is increased in hepatocellular carcinoma and associated with poor prognosis.20
238612182013Genetic variations in the PRKAA1 and ZBTB20 genes and gastric cancer susceptibility in a Korean population.17

Citation

Dessen P

ZBTB20 (zinc finger and BTB domain containing 20)

Atlas Genet Cytogenet Oncol Haematol. 2003-02-01

Online version: http://atlasgeneticsoncology.org/gene/42877/zbtb20