ZC3H13 (zinc finger CCCH-type containing 13)

2014-11-01  

Identity

HGNC
ZC3H13
LOCATION
13q14.13
LOCUSID
23091
ALIAS
KIAA0853,Xio
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 23091
MIM: 616453
HGNC: 20368
Ensembl: ENSG00000123200

Variants:

dbSNP: 23091
ClinVar: 23091
TCGA: ENSG00000123200
COSMIC: ZC3H13

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000123200ENST00000242848Q5T200
ENSG00000123200ENST00000282007Q5T200
ENSG00000123200ENST00000428921Q5T9K0
ENSG00000123200ENST00000464597A0A087WX14

Expression (GTEx)

0
5
10
15
20
25
30
35
40
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
245078842014Combined analysis of exon splicing and genome wide polymorphism data predict schizophrenia risk loci.14
303112202019ZC3H13 suppresses colorectal cancer proliferation and invasion via inactivating Ras-ERK signaling.10

Citation

Dessen P

ZC3H13 (zinc finger CCCH-type containing 13)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/75880/zc3h13