Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ZKSCAN7-AS1 (ZKSCAN7 ZNF cluster antisense RNA 1)

Identity

Other alias-
HGNC (Hugo) ZKSCAN7-AS1
LocusID (NCBI) 112840933
Atlas_Id 80659
Location 3p21.31  [Link to chromosome band 3p21]
Location_base_pair Starts at 44557357 and ends at 44685653 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)ZKSCAN7-AS1   53964
Cards
Entrez_Gene (NCBI)ZKSCAN7-AS1  112840933  ZKSCAN7 ZNF cluster antisense RNA 1
Aliases
GeneCards (Weizmann)ZKSCAN7-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr3:44557357-44685653 [Contig_View]  ZKSCAN7-AS1 [Vega]
TCGA cBioPortalZKSCAN7-AS1
AceView (NCBI)ZKSCAN7-AS1
Genatlas (Paris)ZKSCAN7-AS1
WikiGenes112840933
SOURCE (Princeton)ZKSCAN7-AS1
Genetics Home Reference (NIH)ZKSCAN7-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ZKSCAN7-AS1  -     chr3:44557357-44685653 -  3p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZKSCAN7-AS1  -     3p21.31   [Description]    (hg19-Feb_2009)
GoldenPathZKSCAN7-AS1 - 3p21.31 [CytoView hg19]  ZKSCAN7-AS1 - 3p21.31 [CytoView hg38]
Mapping of homologs : NCBIZKSCAN7-AS1 [Mapview hg19]  ZKSCAN7-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZKSCAN7-AS1
Gene ExpressionZKSCAN7-AS1 [ NCBI-GEO ]   ZKSCAN7-AS1 [ EBI - ARRAY_EXPRESS ]   ZKSCAN7-AS1 [ SEEK ]   ZKSCAN7-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ZKSCAN7-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)112840933
GTEX Portal (Tissue expression)ZKSCAN7-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZKSCAN7-AS1
DMDM Disease mutations112840933
Blocks (Seattle)ZKSCAN7-AS1
Protein Interaction databases
BioGRIDZKSCAN7-AS1
STRING (EMBL)ZKSCAN7-AS1
ZODIACZKSCAN7-AS1
Ontologies - Pathways
Huge Navigator ZKSCAN7-AS1 [HugePedia]
snp3D : Map Gene to Disease112840933
BioCentury BCIQZKSCAN7-AS1
ClinGenZKSCAN7-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD112840933
Clinical trialZKSCAN7-AS1
Miscellaneous
canSAR (ICR)ZKSCAN7-AS1 (select the gene name)
DataMed IndexZKSCAN7-AS1
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZKSCAN7-AS1
EVEXZKSCAN7-AS1
GoPubMedZKSCAN7-AS1
iHOPZKSCAN7-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 16:13:36 CEST 2019

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.