Atlas of Genetics and Cytogenetics in Oncology and Haematology

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ZNF252P-AS1 (ZNF252P antisense RNA 1)

Identity

Alias_namesC8orf77
chromosome 8 open reading frame 77
ZNF252P antisense RNA 1 (non-protein coding)
Other alias
HGNC (Hugo) ZNF252P-AS1
LocusID (NCBI) 286103
Atlas_Id 76053
Location 8q24.3  [Link to chromosome band 8q24]
Location_base_pair Starts at 145002986 and ends at 145005629 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ZNF252P-AS1   27821
Cards
Entrez_Gene (NCBI)ZNF252P-AS1  286103  ZNF252P antisense RNA 1
AliasesC8orf77
GeneCards (Weizmann)ZNF252P-AS1
Ensembl hg19 (Hinxton)ENSG00000255559 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255559 [Gene_View]  ENSG00000255559 [Sequence]  chr8:145002986-145005629 [Contig_View]  ZNF252P-AS1 [Vega]
ICGC DataPortalENSG00000255559
TCGA cBioPortalZNF252P-AS1
AceView (NCBI)ZNF252P-AS1
Genatlas (Paris)ZNF252P-AS1
WikiGenes286103
SOURCE (Princeton)ZNF252P-AS1
Genetics Home Reference (NIH)ZNF252P-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF252P-AS1  -     chr8:145002986-145005629 +  8q24.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF252P-AS1  -     8q24.3   [Description]    (hg19-Feb_2009)
GoldenPathZNF252P-AS1 - 8q24.3 [CytoView hg19]  ZNF252P-AS1 - 8q24.3 [CytoView hg38]
ImmunoBaseENSG00000255559
Mapping of homologs : NCBIZNF252P-AS1 [Mapview hg19]  ZNF252P-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK092777 BC046439 BC122544 BX104600
RefSeq transcript (Entrez)NM_001039382
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF252P-AS1
Cluster EST : UnigeneHs.359978 [ NCBI ]
CGAP (NCI)Hs.359978
Alternative Splicing GalleryENSG00000255559
Gene ExpressionZNF252P-AS1 [ NCBI-GEO ]   ZNF252P-AS1 [ EBI - ARRAY_EXPRESS ]   ZNF252P-AS1 [ SEEK ]   ZNF252P-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF252P-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)286103
GTEX Portal (Tissue expression)ZNF252P-AS1
Human Protein AtlasENSG00000255559-ZNF252P-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ0IIN9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ0IIN9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ0IIN9
Splice isoforms : SwissVarQ0IIN9
PhosPhoSitePlusQ0IIN9
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZNF252P-AS1
DMDM Disease mutations286103
Blocks (Seattle)ZNF252P-AS1
SuperfamilyQ0IIN9
Human Protein Atlas [tissue]ENSG00000255559-ZNF252P-AS1 [tissue]
Peptide AtlasQ0IIN9
IPIIPI00167983   
Protein Interaction databases
DIP (DOE-UCLA)Q0IIN9
IntAct (EBI)Q0IIN9
FunCoupENSG00000255559
BioGRIDZNF252P-AS1
STRING (EMBL)ZNF252P-AS1
ZODIACZNF252P-AS1
Ontologies - Pathways
QuickGOQ0IIN9
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkZNF252P-AS1
Atlas of Cancer Signalling NetworkZNF252P-AS1
Wikipedia pathwaysZNF252P-AS1
Orthology - Evolution
OrthoDB286103
GeneTree (enSembl)ENSG00000255559
Phylogenetic Trees/Animal Genes : TreeFamZNF252P-AS1
HOGENOMQ0IIN9
Homologs : HomoloGeneZNF252P-AS1
Homology/Alignments : Family Browser (UCSC)ZNF252P-AS1
Gene fusions - Rearrangements
Fusion : QuiverZNF252P-AS1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF252P-AS1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF252P-AS1
dbVarZNF252P-AS1
ClinVarZNF252P-AS1
1000_GenomesZNF252P-AS1 
Exome Variant ServerZNF252P-AS1
ExAC (Exome Aggregation Consortium)ENSG00000255559
GNOMAD BrowserENSG00000255559
Varsome BrowserZNF252P-AS1
Genetic variants : HAPMAP286103
Genomic Variants (DGV)ZNF252P-AS1 [DGVbeta]
DECIPHERZNF252P-AS1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF252P-AS1 
Mutations
ICGC Data PortalZNF252P-AS1 
TCGA Data PortalZNF252P-AS1 
Broad Tumor PortalZNF252P-AS1
OASIS PortalZNF252P-AS1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDZNF252P-AS1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF252P-AS1
DgiDB (Drug Gene Interaction Database)ZNF252P-AS1
DoCM (Curated mutations)ZNF252P-AS1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF252P-AS1 (select a term)
intoGenZNF252P-AS1
Cancer3DZNF252P-AS1(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF252P-AS1
MedgenZNF252P-AS1
Genetic Testing Registry ZNF252P-AS1
NextProtQ0IIN9 [Medical]
TSGene286103
GENETestsZNF252P-AS1
Target ValidationZNF252P-AS1
Huge Navigator ZNF252P-AS1 [HugePedia]
snp3D : Map Gene to Disease286103
BioCentury BCIQZNF252P-AS1
ClinGenZNF252P-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD286103
Chemical/Pharm GKB GenePA142672340
Clinical trialZNF252P-AS1
Miscellaneous
canSAR (ICR)ZNF252P-AS1 (select the gene name)
DataMed IndexZNF252P-AS1
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF252P-AS1
EVEXZNF252P-AS1
GoPubMedZNF252P-AS1
iHOPZNF252P-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 16:13:51 CEST 2019
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