Atlas of Genetics and Cytogenetics in Oncology and Haematology


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ZNF382 (zinc finger protein 382)

Identity

Alias_symbol (synonym)FLJ14686
KS1
Other alias
HGNC (Hugo) ZNF382
LocusID (NCBI) 84911
Atlas_Id 51753
Location 19q13.12  [Link to chromosome band 19q13]
Location_base_pair Starts at 36605305 and ends at 36628597 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF382   17409
Cards
Entrez_Gene (NCBI)ZNF382  84911  zinc finger protein 382
AliasesKS1
GeneCards (Weizmann)ZNF382
Ensembl hg19 (Hinxton)ENSG00000161298 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000161298 [Gene_View]  ENSG00000161298 [Sequence]  chr19:36605305-36628597 [Contig_View]  ZNF382 [Vega]
ICGC DataPortalENSG00000161298
TCGA cBioPortalZNF382
AceView (NCBI)ZNF382
Genatlas (Paris)ZNF382
WikiGenes84911
SOURCE (Princeton)ZNF382
Genetics Home Reference (NIH)ZNF382
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF382  -     chr19:36605305-36628597 +  19q13.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF382  -     19q13.12   [Description]    (hg19-Feb_2009)
GoldenPathZNF382 - 19q13.12 [CytoView hg19]  ZNF382 - 19q13.12 [CytoView hg38]
ImmunoBaseENSG00000161298
Mapping of homologs : NCBIZNF382 [Mapview hg19]  ZNF382 [Mapview hg38]
OMIM609516   
Gene and transcription
Genbank (Entrez)AF513816 AK027592 AL832265 AY227449 BC038358
RefSeq transcript (Entrez)NM_001256838 NM_032825
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF382
Cluster EST : UnigeneHs.631591 [ NCBI ]
CGAP (NCI)Hs.631591
Alternative Splicing GalleryENSG00000161298
Gene ExpressionZNF382 [ NCBI-GEO ]   ZNF382 [ EBI - ARRAY_EXPRESS ]   ZNF382 [ SEEK ]   ZNF382 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF382 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84911
GTEX Portal (Tissue expression)ZNF382
Human Protein AtlasENSG00000161298-ZNF382 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96SR6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96SR6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96SR6
Splice isoforms : SwissVarQ96SR6
PhosPhoSitePlusQ96SR6
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)   
Domain families : Pfam (NCBI)pfam01352   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF382
DMDM Disease mutations84911
Blocks (Seattle)ZNF382
SuperfamilyQ96SR6
Human Protein Atlas [tissue]ENSG00000161298-ZNF382 [tissue]
Peptide AtlasQ96SR6
HPRD18331
IPIIPI00797562   IPI00639866   IPI00027563   IPI00978412   
Protein Interaction databases
DIP (DOE-UCLA)Q96SR6
IntAct (EBI)Q96SR6
FunCoupENSG00000161298
BioGRIDZNF382
STRING (EMBL)ZNF382
ZODIACZNF382
Ontologies - Pathways
QuickGOQ96SR6
Ontology : AmiGODNA-binding transcription factor activity, RNA polymerase II-specific  DNA binding  nucleus  regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBIDNA-binding transcription factor activity, RNA polymerase II-specific  DNA binding  nucleus  regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF382
Atlas of Cancer Signalling NetworkZNF382
Wikipedia pathwaysZNF382
Orthology - Evolution
OrthoDB84911
GeneTree (enSembl)ENSG00000161298
Phylogenetic Trees/Animal Genes : TreeFamZNF382
HOGENOMQ96SR6
Homologs : HomoloGeneZNF382
Homology/Alignments : Family Browser (UCSC)ZNF382
Gene fusions - Rearrangements
Fusion : QuiverZNF382
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF382 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF382
dbVarZNF382
ClinVarZNF382
1000_GenomesZNF382 
Exome Variant ServerZNF382
ExAC (Exome Aggregation Consortium)ENSG00000161298
GNOMAD BrowserENSG00000161298
Varsome BrowserZNF382
Genetic variants : HAPMAP84911
Genomic Variants (DGV)ZNF382 [DGVbeta]
DECIPHERZNF382 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF382 
Mutations
ICGC Data PortalZNF382 
TCGA Data PortalZNF382 
Broad Tumor PortalZNF382
OASIS PortalZNF382 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF382  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF382
Mutations and Diseases : HGMDZNF382
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF382
DgiDB (Drug Gene Interaction Database)ZNF382
DoCM (Curated mutations)ZNF382 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF382 (select a term)
intoGenZNF382
Cancer3DZNF382(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609516   
Orphanet
DisGeNETZNF382
MedgenZNF382
Genetic Testing Registry ZNF382
NextProtQ96SR6 [Medical]
TSGene84911
GENETestsZNF382
Target ValidationZNF382
Huge Navigator ZNF382 [HugePedia]
snp3D : Map Gene to Disease84911
BioCentury BCIQZNF382
ClinGenZNF382
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84911
Chemical/Pharm GKB GenePA134869965
Clinical trialZNF382
Miscellaneous
canSAR (ICR)ZNF382 (select the gene name)
DataMed IndexZNF382
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF382
EVEXZNF382
GoPubMedZNF382
iHOPZNF382
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Nov 13 18:16:18 CET 2019

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