ZNF568 (zinc finger protein 568)

2014-11-01  

Identity

HGNC
ZNF568
LOCATION
19q13.12
LOCUSID
374900
ALIAS
ZFP568

Other Information

Locus ID:

NCBI: 374900
MIM: 617566
HGNC: 25392
Ensembl: ENSG00000198453

Variants:

dbSNP: 374900
ClinVar: 374900
TCGA: ENSG00000198453
COSMIC: ZNF568

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000198453ENST00000333987Q3ZCX4
ENSG00000198453ENST00000415168Q3ZCX4
ENSG00000198453ENST00000427117C9JZ58
ENSG00000198453ENST00000433993C9K0F2
ENSG00000198453ENST00000444991C9JLX5
ENSG00000198453ENST00000455427Q3ZCX4
ENSG00000198453ENST00000455817C9JXQ5
ENSG00000198453ENST00000586353K7EKY2
ENSG00000198453ENST00000587130A0A1Y8EHF7
ENSG00000198453ENST00000587857A0A0C4DGP9
ENSG00000198453ENST00000588596K7ELK8
ENSG00000198453ENST00000592567K7EL97
ENSG00000198453ENST00000616085A0A087WWI3
ENSG00000198453ENST00000617745A0A087WZ84
ENSG00000198453ENST00000619231Q3ZCX4

Expression (GTEx)

0
1
2
3
4
5
6
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Gene ExpressionREACTOMER-HSA-74160
Generic Transcription PathwayREACTOMER-HSA-212436

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA445048NauseaDiseaseClinicalAnnotationassociatedPD
PA446051VomitingDiseaseClinicalAnnotationassociatedPD
PA452618opioidsChemicalClinicalAnnotationassociatedPD

References

Pubmed IDYearTitleCitations
208555652010Common genetic variation in multiple metabolic pathways influences susceptibility to low HDL-cholesterol and coronary heart disease.27
230718132012Targeted disruption in mice of a neural stem cell-maintaining, KRAB-Zn finger-encoding gene that has rapidly evolved in the human lineage.0

Citation

Dessen P

ZNF568 (zinc finger protein 568)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/76246/znf568