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ZNF624 (zinc finger protein 624)

Identity

Alias_symbol (synonym)KIAA1349
Other alias-
HGNC (Hugo) ZNF624
LocusID (NCBI) 57547
Atlas_Id 76290
Location 17p11.2  [Link to chromosome band 17p11]
Location_base_pair Starts at 16620734 and ends at 16653853 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
DRG2 (17p11.2) / ZNF624 (17p11.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  DRG2/ZNF624 (17p11)

External links

Nomenclature
HGNC (Hugo)ZNF624   29254
Cards
Entrez_Gene (NCBI)ZNF624  57547  zinc finger protein 624
Aliases
GeneCards (Weizmann)ZNF624
Ensembl hg19 (Hinxton)ENSG00000197566 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000197566 [Gene_View]  ENSG00000197566 [Sequence]  chr17:16620734-16653853 [Contig_View]  ZNF624 [Vega]
ICGC DataPortalENSG00000197566
TCGA cBioPortalZNF624
AceView (NCBI)ZNF624
Genatlas (Paris)ZNF624
WikiGenes57547
SOURCE (Princeton)ZNF624
Genetics Home Reference (NIH)ZNF624
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF624  -     chr17:16620734-16653853 -  17p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF624  -     17p11.2   [Description]    (hg19-Feb_2009)
GoldenPathZNF624 - 17p11.2 [CytoView hg19]  ZNF624 - 17p11.2 [CytoView hg38]
ImmunoBaseENSG00000197566
genome Data Viewer NCBIZNF624 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AB037770 AI913542 AK131401 BC103943 BC103944
RefSeq transcript (Entrez)NM_020787
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF624
Alternative Splicing GalleryENSG00000197566
Gene ExpressionZNF624 [ NCBI-GEO ]   ZNF624 [ EBI - ARRAY_EXPRESS ]   ZNF624 [ SEEK ]   ZNF624 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF624 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF624 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)57547
GTEX Portal (Tissue expression)ZNF624
Human Protein AtlasENSG00000197566-ZNF624 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P2J8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P2J8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P2J8
Splice isoforms : SwissVarQ9P2J8
PhosPhoSitePlusQ9P2J8
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF624
DMDM Disease mutations57547
Blocks (Seattle)ZNF624
SuperfamilyQ9P2J8
Human Protein Atlas [tissue]ENSG00000197566-ZNF624 [tissue]
Peptide AtlasQ9P2J8
HPRD18359
IPIIPI00412544   IPI00930252   IPI00792502   
Protein Interaction databases
DIP (DOE-UCLA)Q9P2J8
IntAct (EBI)Q9P2J8
FunCoupENSG00000197566
BioGRIDZNF624
STRING (EMBL)ZNF624
ZODIACZNF624
Ontologies - Pathways
QuickGOQ9P2J8
Ontology : AmiGODNA binding  protein binding  nucleus  regulation of transcription, DNA-templated  metal ion binding  
Ontology : EGO-EBIDNA binding  protein binding  nucleus  regulation of transcription, DNA-templated  metal ion binding  
NDEx NetworkZNF624
Atlas of Cancer Signalling NetworkZNF624
Wikipedia pathwaysZNF624
Orthology - Evolution
OrthoDB57547
GeneTree (enSembl)ENSG00000197566
Phylogenetic Trees/Animal Genes : TreeFamZNF624
HOGENOMQ9P2J8
Homologs : HomoloGeneZNF624
Homology/Alignments : Family Browser (UCSC)ZNF624
Gene fusions - Rearrangements
Fusion : QuiverZNF624
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF624 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF624
dbVarZNF624
ClinVarZNF624
1000_GenomesZNF624 
Exome Variant ServerZNF624
GNOMAD BrowserENSG00000197566
Varsome BrowserZNF624
Genetic variants : HAPMAP57547
Genomic Variants (DGV)ZNF624 [DGVbeta]
DECIPHERZNF624 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF624 
Mutations
ICGC Data PortalZNF624 
TCGA Data PortalZNF624 
Broad Tumor PortalZNF624
OASIS PortalZNF624 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF624  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF624
Mutations and Diseases : HGMDZNF624
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF624
DgiDB (Drug Gene Interaction Database)ZNF624
DoCM (Curated mutations)ZNF624 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF624 (select a term)
intoGenZNF624
Cancer3DZNF624(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF624
MedgenZNF624
Genetic Testing Registry ZNF624
NextProtQ9P2J8 [Medical]
TSGene57547
GENETestsZNF624
Target ValidationZNF624
Huge Navigator ZNF624 [HugePedia]
snp3D : Map Gene to Disease57547
BioCentury BCIQZNF624
ClinGenZNF624
Clinical trials, drugs, therapy
Protein Interactions : CTD57547
Pharm GKB GenePA134977006
Clinical trialZNF624
Miscellaneous
canSAR (ICR)ZNF624 (select the gene name)
HarmonizomeZNF624
DataMed IndexZNF624
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF624
EVEXZNF624
GoPubMedZNF624
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Jul 10 20:45:35 CEST 2020
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