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ZNF8-ERVK3-1 (ZNF8-ERVK3-1 readthrough)

Identity

Alias (NCBI)-
HGNC (Hugo) -
LocusID (NCBI) 108903150
Atlas_Id 79699
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 58278966 and ends at 58315657 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)ZNF8-ERVK3-1  108903150  ZNF8-ERVK3-1 readthrough
Aliases
GeneCards (Weizmann)ZNF8-ERVK3-1
Ensembl hg19 (Hinxton)ENSG00000267216 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000267216 [Gene_View]  ENSG00000267216 [Sequence]  chr19:58278966-58315657 [Contig_View]  ZNF8-ERVK3-1 [Vega]
ICGC DataPortalENSG00000267216
TCGA cBioPortalZNF8-ERVK3-1
AceView (NCBI)ZNF8-ERVK3-1
Genatlas (Paris)ZNF8-ERVK3-1
WikiGenes108903150
SOURCE (Princeton)ZNF8-ERVK3-1
Genetics Home Reference (NIH)ZNF8-ERVK3-1
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF8-ERVK3-1  -     chr19:58278966-58315657 +  19q13.43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF8-ERVK3-1  -     19q13.43   [Description]    (hg19-Feb_2009)
GoldenPathZNF8-ERVK3-1 - 19q13.43 [CytoView hg19]  ZNF8-ERVK3-1 - 19q13.43 [CytoView hg38]
ImmunoBaseENSG00000267216
genome Data Viewer NCBIZNF8-ERVK3-1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK294246
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF8-ERVK3-1
Alternative Splicing GalleryENSG00000267216
Gene ExpressionZNF8-ERVK3-1 [ NCBI-GEO ]   ZNF8-ERVK3-1 [ EBI - ARRAY_EXPRESS ]   ZNF8-ERVK3-1 [ SEEK ]   ZNF8-ERVK3-1 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF8-ERVK3-1 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF8-ERVK3-1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)108903150
GTEX Portal (Tissue expression)ZNF8-ERVK3-1
Human Protein AtlasENSG00000267216-ZNF8-ERVK3-1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)ZNF8-ERVK3-1
DMDM Disease mutations108903150
Blocks (Seattle)ZNF8-ERVK3-1
Human Protein Atlas [tissue]ENSG00000267216-ZNF8-ERVK3-1 [tissue]
Protein Interaction databases
FunCoupENSG00000267216
BioGRIDZNF8-ERVK3-1
STRING (EMBL)ZNF8-ERVK3-1
ZODIACZNF8-ERVK3-1
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease108903150
BioCentury BCIQZNF8-ERVK3-1
ClinGenZNF8-ERVK3-1
Clinical trials, drugs, therapy
Protein Interactions : CTD108903150
Clinical trialZNF8-ERVK3-1
Miscellaneous
canSAR (ICR)ZNF8-ERVK3-1 (select the gene name)
HarmonizomeZNF8-ERVK3-1
DataMed IndexZNF8-ERVK3-1
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF8-ERVK3-1
EVEXZNF8-ERVK3-1
GoPubMedZNF8-ERVK3-1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jul 16 16:37:36 CEST 2020

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