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ZNF805 (zinc finger protein 805)

Identity

Other alias-
HGNC (Hugo) ZNF805
LocusID (NCBI) 390980
Atlas_Id 76418
Location 19q13.43  [Link to chromosome band 19q13]
Location_base_pair Starts at 57240685 and ends at 57262738 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF805 (19q13.43) / ETFB (19q13.41)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)ZNF805   23272
Cards
Entrez_Gene (NCBI)ZNF805  390980  zinc finger protein 805
Aliases
GeneCards (Weizmann)ZNF805
Ensembl hg19 (Hinxton)ENSG00000204524 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000204524 [Gene_View]  ENSG00000204524 [Sequence]  chr19:57240685-57262738 [Contig_View]  ZNF805 [Vega]
ICGC DataPortalENSG00000204524
TCGA cBioPortalZNF805
AceView (NCBI)ZNF805
Genatlas (Paris)ZNF805
WikiGenes390980
SOURCE (Princeton)ZNF805
Genetics Home Reference (NIH)ZNF805
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF805  -     chr19:57240685-57262738 +  19q13.43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF805  -     19q13.43   [Description]    (hg19-Feb_2009)
GoldenPathZNF805 - 19q13.43 [CytoView hg19]  ZNF805 - 19q13.43 [CytoView hg38]
ImmunoBaseENSG00000204524
Mapping of homologs : NCBIZNF805 [Mapview hg19]  ZNF805 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF024708 AK297977 BC140786 CR936617
RefSeq transcript (Entrez)NM_001023563 NM_001145078
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF805
Cluster EST : UnigeneHs.22488 [ NCBI ]
CGAP (NCI)Hs.22488
Alternative Splicing GalleryENSG00000204524
Gene ExpressionZNF805 [ NCBI-GEO ]   ZNF805 [ EBI - ARRAY_EXPRESS ]   ZNF805 [ SEEK ]   ZNF805 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF805 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)390980
GTEX Portal (Tissue expression)ZNF805
Human Protein AtlasENSG00000204524-ZNF805 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ5CZA5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ5CZA5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ5CZA5
Splice isoforms : SwissVarQ5CZA5
PhosPhoSitePlusQ5CZA5
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)   
Domain families : Pfam (NCBI)pfam01352   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF805
DMDM Disease mutations390980
Blocks (Seattle)ZNF805
SuperfamilyQ5CZA5
Human Protein Atlas [tissue]ENSG00000204524-ZNF805 [tissue]
Peptide AtlasQ5CZA5
HPRD18617
IPIIPI00397000   IPI00920950   IPI01011048   
Protein Interaction databases
DIP (DOE-UCLA)Q5CZA5
IntAct (EBI)Q5CZA5
FunCoupENSG00000204524
BioGRIDZNF805
STRING (EMBL)ZNF805
ZODIACZNF805
Ontologies - Pathways
QuickGOQ5CZA5
Ontology : AmiGODNA-binding transcription factor activity, RNA polymerase II-specific  DNA binding  nucleus  regulation of transcription by RNA polymerase II  metal ion binding  
Ontology : EGO-EBIDNA-binding transcription factor activity, RNA polymerase II-specific  DNA binding  nucleus  regulation of transcription by RNA polymerase II  metal ion binding  
NDEx NetworkZNF805
Atlas of Cancer Signalling NetworkZNF805
Wikipedia pathwaysZNF805
Orthology - Evolution
OrthoDB390980
GeneTree (enSembl)ENSG00000204524
Phylogenetic Trees/Animal Genes : TreeFamZNF805
HOGENOMQ5CZA5
Homologs : HomoloGeneZNF805
Homology/Alignments : Family Browser (UCSC)ZNF805
Gene fusions - Rearrangements
Fusion : QuiverZNF805
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF805 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF805
dbVarZNF805
ClinVarZNF805
1000_GenomesZNF805 
Exome Variant ServerZNF805
ExAC (Exome Aggregation Consortium)ENSG00000204524
GNOMAD BrowserENSG00000204524
Varsome BrowserZNF805
Genetic variants : HAPMAP390980
Genomic Variants (DGV)ZNF805 [DGVbeta]
DECIPHERZNF805 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF805 
Mutations
ICGC Data PortalZNF805 
TCGA Data PortalZNF805 
Broad Tumor PortalZNF805
OASIS PortalZNF805 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF805  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF805
Mutations and Diseases : HGMDZNF805
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF805
DgiDB (Drug Gene Interaction Database)ZNF805
DoCM (Curated mutations)ZNF805 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF805 (select a term)
intoGenZNF805
Cancer3DZNF805(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF805
MedgenZNF805
Genetic Testing Registry ZNF805
NextProtQ5CZA5 [Medical]
TSGene390980
GENETestsZNF805
Target ValidationZNF805
Huge Navigator ZNF805 [HugePedia]
snp3D : Map Gene to Disease390980
BioCentury BCIQZNF805
ClinGenZNF805
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD390980
Chemical/Pharm GKB GenePA162410601
Clinical trialZNF805
Miscellaneous
canSAR (ICR)ZNF805 (select the gene name)
DataMed IndexZNF805
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF805
EVEXZNF805
GoPubMedZNF805
iHOPZNF805
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Sep 3 16:14:58 CEST 2019

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