Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

ZNF826P (zinc finger protein 826, pseudogene)

Identity

Alias_namesZNF826
zinc finger protein 826
Alias_symbol (synonym)FLJ44894
Other alias
HGNC (Hugo) ZNF826P
LocusID (NCBI) 664701
Atlas_Id 76430
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 20404967 and ends at 20424965 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)ZNF826P   33875
Cards
Entrez_Gene (NCBI)ZNF826P  664701  zinc finger protein 826, pseudogene
AliasesZNF826
GeneCards (Weizmann)ZNF826P
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr19:20404967-20424965 [Contig_View]  ZNF826P [Vega]
TCGA cBioPortalZNF826P
AceView (NCBI)ZNF826P
Genatlas (Paris)ZNF826P
WikiGenes664701
SOURCE (Princeton)ZNF826P
Genetics Home Reference (NIH)ZNF826P
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF826P  -     chr19:20404967-20424965 -  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF826P  -     19p12   [Description]    (hg19-Feb_2009)
GoldenPathZNF826P - 19p12 [CytoView hg19]  ZNF826P - 19p12 [CytoView hg38]
Mapping of homologs : NCBIZNF826P [Mapview hg19]  ZNF826P [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC016785 BC017970 BC022411 BC036006 BM678443
RefSeq transcript (Entrez)NM_001039884
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF826P
Cluster EST : UnigeneHs.732997 [ NCBI ]
CGAP (NCI)Hs.732997
Gene ExpressionZNF826P [ NCBI-GEO ]   ZNF826P [ EBI - ARRAY_EXPRESS ]   ZNF826P [ SEEK ]   ZNF826P [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF826P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)664701
GTEX Portal (Tissue expression)ZNF826P
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6ZT77   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6ZT77  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6ZT77
Splice isoforms : SwissVarQ6ZT77
PhosPhoSitePlusQ6ZT77
Domaine pattern : Prosite (Expaxy)ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF826P
DMDM Disease mutations664701
Blocks (Seattle)ZNF826P
SuperfamilyQ6ZT77
Peptide AtlasQ6ZT77
IPIIPI00888080   IPI00879530   IPI01018014   
Protein Interaction databases
DIP (DOE-UCLA)Q6ZT77
IntAct (EBI)Q6ZT77
BioGRIDZNF826P
STRING (EMBL)ZNF826P
ZODIACZNF826P
Ontologies - Pathways
QuickGOQ6ZT77
Ontology : AmiGODNA binding  nucleus  metal ion binding  
Ontology : EGO-EBIDNA binding  nucleus  metal ion binding  
NDEx NetworkZNF826P
Atlas of Cancer Signalling NetworkZNF826P
Wikipedia pathwaysZNF826P
Orthology - Evolution
OrthoDB664701
Phylogenetic Trees/Animal Genes : TreeFamZNF826P
HOGENOMQ6ZT77
Homologs : HomoloGeneZNF826P
Homology/Alignments : Family Browser (UCSC)ZNF826P
Gene fusions - Rearrangements
Fusion : QuiverZNF826P
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF826P [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF826P
dbVarZNF826P
ClinVarZNF826P
1000_GenomesZNF826P 
Exome Variant ServerZNF826P
Varsome BrowserZNF826P
Genetic variants : HAPMAP664701
Genomic Variants (DGV)ZNF826P [DGVbeta]
DECIPHERZNF826P [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF826P 
Mutations
ICGC Data PortalZNF826P 
TCGA Data PortalZNF826P 
Broad Tumor PortalZNF826P
OASIS PortalZNF826P [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF826P  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF826P
Mutations and Diseases : HGMDZNF826P
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF826P
DgiDB (Drug Gene Interaction Database)ZNF826P
DoCM (Curated mutations)ZNF826P (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF826P (select a term)
intoGenZNF826P
Cancer3DZNF826P(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETZNF826P
MedgenZNF826P
Genetic Testing Registry ZNF826P
NextProtQ6ZT77 [Medical]
TSGene664701
GENETestsZNF826P
Target ValidationZNF826P
Huge Navigator ZNF826P [HugePedia]
snp3D : Map Gene to Disease664701
BioCentury BCIQZNF826P
ClinGenZNF826P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD664701
Chemical/Pharm GKB GenePA162410703
Clinical trialZNF826P
Miscellaneous
canSAR (ICR)ZNF826P (select the gene name)
DataMed IndexZNF826P
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF826P
EVEXZNF826P
GoPubMedZNF826P
iHOPZNF826P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Sep 3 16:15:00 CEST 2019
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.