Atlas of Genetics and Cytogenetics in Oncology and Haematology

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ZNF91 (zinc finger protein 91)

Identity

Alias_nameszinc finger protein 91 (HPF7, HTF10)
Alias_symbol (synonym)HPF7
HTF10
Other alias
HGNC (Hugo) ZNF91
LocusID (NCBI) 7644
Atlas_Id 76460
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 23357696 and ends at 23395560 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ZNF91 (19p12) / CCDC88A (2p16.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(2;19)(p16;p12) ZNF91/CCDC88A

External links

Nomenclature
HGNC (Hugo)ZNF91   13166
Cards
Entrez_Gene (NCBI)ZNF91  7644  zinc finger protein 91
AliasesHPF7; HTF10
GeneCards (Weizmann)ZNF91
Ensembl hg19 (Hinxton)ENSG00000167232 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000167232 [Gene_View]  ENSG00000167232 [Sequence]  chr19:23357696-23395560 [Contig_View]  ZNF91 [Vega]
ICGC DataPortalENSG00000167232
TCGA cBioPortalZNF91
AceView (NCBI)ZNF91
Genatlas (Paris)ZNF91
WikiGenes7644
SOURCE (Princeton)ZNF91
Genetics Home Reference (NIH)ZNF91
Genomic and cartography
GoldenPath hg38 (UCSC)ZNF91  -     chr19:23357696-23395560 -  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)ZNF91  -     19p12   [Description]    (hg19-Feb_2009)
GoldenPathZNF91 - 19p12 [CytoView hg19]  ZNF91 - 19p12 [CytoView hg38]
ImmunoBaseENSG00000167232
genome Data Viewer NCBIZNF91 [Mapview hg19]  
OMIM603971   
Gene and transcription
Genbank (Entrez)AI590336 AK002041 AK090762 AK291256 AK300294
RefSeq transcript (Entrez)NM_001300951 NM_003430
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)ZNF91
Alternative Splicing GalleryENSG00000167232
Gene ExpressionZNF91 [ NCBI-GEO ]   ZNF91 [ EBI - ARRAY_EXPRESS ]   ZNF91 [ SEEK ]   ZNF91 [ MEM ]
Gene Expression Viewer (FireBrowse)ZNF91 [ Firebrowse - Broad ]
GenevisibleExpression of ZNF91 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)7644
GTEX Portal (Tissue expression)ZNF91
Human Protein AtlasENSG00000167232-ZNF91 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ05481   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ05481  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ05481
Splice isoforms : SwissVarQ05481
PhosPhoSitePlusQ05481
Domaine pattern : Prosite (Expaxy)KRAB (PS50805)    ZINC_FINGER_C2H2_1 (PS00028)    ZINC_FINGER_C2H2_2 (PS50157)   
Domains : Interpro (EBI)KRAB    KRAB_dom_sf    Znf_C2H2_sf    Znf_C2H2_type   
Domain families : Pfam (Sanger)KRAB (PF01352)    zf-C2H2 (PF00096)   
Domain families : Pfam (NCBI)pfam01352    pfam00096   
Domain families : Smart (EMBL)KRAB (SM00349)  ZnF_C2H2 (SM00355)  
Conserved Domain (NCBI)ZNF91
DMDM Disease mutations7644
Blocks (Seattle)ZNF91
SuperfamilyQ05481
Human Protein Atlas [tissue]ENSG00000167232-ZNF91 [tissue]
Peptide AtlasQ05481
HPRD04916
IPIIPI00013437   IPI00873227   
Protein Interaction databases
DIP (DOE-UCLA)Q05481
IntAct (EBI)Q05481
FunCoupENSG00000167232
BioGRIDZNF91
STRING (EMBL)ZNF91
ZODIACZNF91
Ontologies - Pathways
QuickGOQ05481
Ontology : AmiGODNA-binding transcription factor activity, RNA polymerase II-specific  DNA binding  DNA-binding transcription factor activity  DNA-binding transcription factor activity  nucleus  nucleus  regulation of transcription by RNA polymerase II  zinc ion binding  negative regulation of transcription, DNA-templated  negative regulation of transposon integration  
Ontology : EGO-EBIDNA-binding transcription factor activity, RNA polymerase II-specific  DNA binding  DNA-binding transcription factor activity  DNA-binding transcription factor activity  nucleus  nucleus  regulation of transcription by RNA polymerase II  zinc ion binding  negative regulation of transcription, DNA-templated  negative regulation of transposon integration  
NDEx NetworkZNF91
Atlas of Cancer Signalling NetworkZNF91
Wikipedia pathwaysZNF91
Orthology - Evolution
OrthoDB7644
GeneTree (enSembl)ENSG00000167232
Phylogenetic Trees/Animal Genes : TreeFamZNF91
HOGENOMQ05481
Homologs : HomoloGeneZNF91
Homology/Alignments : Family Browser (UCSC)ZNF91
Gene fusions - Rearrangements
Fusion : QuiverZNF91
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerZNF91 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)ZNF91
dbVarZNF91
ClinVarZNF91
1000_GenomesZNF91 
Exome Variant ServerZNF91
GNOMAD BrowserENSG00000167232
Varsome BrowserZNF91
Genetic variants : HAPMAP7644
Genomic Variants (DGV)ZNF91 [DGVbeta]
DECIPHERZNF91 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisZNF91 
Mutations
ICGC Data PortalZNF91 
TCGA Data PortalZNF91 
Broad Tumor PortalZNF91
OASIS PortalZNF91 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICZNF91  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DZNF91
Mutations and Diseases : HGMDZNF91
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch ZNF91
DgiDB (Drug Gene Interaction Database)ZNF91
DoCM (Curated mutations)ZNF91 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)ZNF91 (select a term)
intoGenZNF91
Cancer3DZNF91(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM603971   
Orphanet
DisGeNETZNF91
MedgenZNF91
Genetic Testing Registry ZNF91
NextProtQ05481 [Medical]
TSGene7644
GENETestsZNF91
Target ValidationZNF91
Huge Navigator ZNF91 [HugePedia]
snp3D : Map Gene to Disease7644
BioCentury BCIQZNF91
ClinGenZNF91
Clinical trials, drugs, therapy
Protein Interactions : CTD7644
Pharm GKB GenePA37739
Clinical trialZNF91
Miscellaneous
canSAR (ICR)ZNF91 (select the gene name)
HarmonizomeZNF91
DataMed IndexZNF91
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineZNF91
EVEXZNF91
GoPubMedZNF91
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri Jul 10 20:46:10 CEST 2020
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