ZSCAN2 (zinc finger and SCAN domain containing 2)

2014-11-01  

Identity

HGNC
ZSCAN2
LOCATION
15q25.2
LOCUSID
54993
ALIAS
ZFP29,ZNF854
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 54993
HGNC: 20994
Ensembl: ENSG00000176371

Variants:

dbSNP: 54993
ClinVar: 54993
TCGA: ENSG00000176371
COSMIC: ZSCAN2

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000176371ENST00000327179A0A0C4DFQ3
ENSG00000176371ENST00000334141Q7Z7L9
ENSG00000176371ENST00000334141A0A024RC69
ENSG00000176371ENST00000358472F8W6Y9
ENSG00000176371ENST00000379358Q7Z7L9
ENSG00000176371ENST00000442073F5H1K4
ENSG00000176371ENST00000448803Q7Z7L9
ENSG00000176371ENST00000485222F5GY18
ENSG00000176371ENST00000502939F5H2D8
ENSG00000176371ENST00000538076F5H3F3
ENSG00000176371ENST00000540894Q7Z7L9
ENSG00000176371ENST00000540936F5H4P1
ENSG00000176371ENST00000541040F5GZ04
ENSG00000176371ENST00000546148Q7Z7L9
ENSG00000176371ENST00000546275F5H789

Expression (GTEx)

0
1
2
3
4
5
6
7
8
9
10
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Protein levels (Protein atlas)

Not detected
Low
Medium
High
cerebral cortex
cerebellum
hippocampus
caudate
thyroid gland
parathyroid gland
adrenal gland
nasopharynx
bronchus
lung
oral mucosa
salivary gland
esophagus
stomach 1
stomach 2
duodenum
small intestine
colon
rectum
liver
gallbladder
pancreas
kidney
urinary bladder
testis
epididymis
seminal vesicle
prostate
vagina
ovary
fallopian tube
endometrium 1
endometrium 2
cervix, uterine
placenta
breast
heart muscle
smooth muscle
skeletal muscle
soft tissue 1
soft tissue 2
adipose tissue
skin 1
skin 2
appendix
spleen
lymph node
tonsil
bone marrow

References

Pubmed IDYearTitleCitations
19370511991A zinc finger protein-encoding gene expressed in the post-meiotic phase of spermatogenesis.9

Citation

Dessen P

ZSCAN2 (zinc finger and SCAN domain containing 2)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/76492/zscan2