ZSCAN25 (zinc finger and SCAN domain containing 25)

2014-11-01  

Identity

HGNC
ZSCAN25
LOCATION
7q22.1
LOCUSID
221785
ALIAS
ZNF498
FUSION GENES
Show Gene Fusions

Other Information

Locus ID:

NCBI: 221785
HGNC: 21961
Ensembl: ENSG00000197037

Variants:

dbSNP: 221785
ClinVar: 221785
TCGA: ENSG00000197037
COSMIC: ZSCAN25

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000197037ENST00000262941A0A0C4DFN0
ENSG00000197037ENST00000334715Q6NSZ9
ENSG00000197037ENST00000394150Q6NSZ9
ENSG00000197037ENST00000394152Q6NSZ9
ENSG00000197037ENST00000431485C9K079

Expression (GTEx)

0
5
10
15
20
Adipose - Subcutaneous
Adipose - Visceral
Adrenal Gland
Artery - Aorta
Artery - Tibial
Bladder
Brain - Amygdala
Brain - Anterior cingulate cortex
Brain - Caudate
Brain - Cerebellar Hemisphere
Brain - Cerebellum
Brain - Cortex
Brain - Frontal Cortex
Brain - Hippocampus
Brain - Hypothalamus
Brain - Nucleus accumbens
Brain - Putamen
Brain - Spinal cord
Brain - Substantia nigra
Breast - Mammary Tissue
Cells - Cultured fibroblasts
Cells - EBV - transformed lymphocytes
Cervix - Ectocervix
Cervix - Endocervix
Colon - Sigmoid
Colon - Transverse
Esophagus - Gastroesophageal Junction
Esophagus - Mucosa
Esophagus - Muscularis
Fallopian Tube
Heart - Atrial Appendage
Heart - Left Ventricle
Kidney - Cortex
Kidney - Medulla
Liver
Lung
Minor Salivary Gland
Muscle - Skeletal
Nerve - Tibial
Ovary
Pancreas
Pituitary
Prostate
Skin - Not Sun Exposed
Skin - Sun Exposed
Small Intestine - Terminal Ileum
Spleen
Stomach
Testis
Thyroid
Uterus
Vagina
Whole Blood

Pathways

PathwaySourceExternal ID
Gene ExpressionREACTOMER-HSA-74160
Generic Transcription PathwayREACTOMER-HSA-212436

Protein levels (Protein atlas)

Not detected
Low
Medium
High
N/A

PharmGKB

Entity IDNameTypeEvidenceAssociationPKPDPMIDs
PA165111722lumefantrineChemicalClinicalAnnotationassociatedPKPD
PA165817016Kidney TransplantationDiseaseClinicalAnnotationassociatedPK29318894, 29454235
PA444859MalariaDiseaseClinicalAnnotationassociatedPKPD
PA447230HIV InfectionsDiseaseClinicalAnnotationassociatedPK
PA447247liver transplantationDiseaseClinicalAnnotationassociatedPK29318894, 29454235
PA450264lopinavirChemicalClinicalAnnotationassociatedPK
PA451578tacrolimusChemicalClinicalAnnotationassociatedPK29318894, 29454235

Citation

Dessen P

ZSCAN25 (zinc finger and SCAN domain containing 25)

Atlas Genet Cytogenet Oncol Haematol. 2014-11-01

Online version: http://atlasgeneticsoncology.org/gene/76496/zscan25